RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 THEMISQ8N1K5 641 aaPredicted RBP6.03□□□□□ -1.44
USP47-206ENST00000525367 OR2I1PQ8NGU4 316 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 WDR48Q8TAF3 677 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 NRG4Q8WWG1 115 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 COA7Q96BR5 231 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 AIFM3Q96NN9 605 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 HAPLN2Q9GZV7 340 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 PTPRHQ9HD43 1115 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 SPATA6Q9NWH7 488 aaPredicted RBP6.03□□□□□ -1.44
USP47-206ENST00000525367 KCMF1Q9P0J7 381 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 LIMCH1Q9UPQ0 1083 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 LAS1LQ9Y4W2 734 aaKnown RBP6.03□□□□□ -1.44
USP47-206ENST00000525367 FRMPD2Q68DX3 1309 aaPredicted RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 SEC24DO94855 1032 aaPredicted RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 HSP90AA1P07900 732 aaKnown RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 MTHFD2P13995 350 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 HNRNPLP14866 589 aaKnown RBP eCLIP6.02□□□□□ -1.45
USP47-206ENST00000525367 PPM1FP49593 454 aaPredicted RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 ADKP55263 362 aaKnown RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 DLX2Q07687 328 aaPredicted RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 MGAT5Q09328 741 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 GALEQ14376 348 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 GRM3Q14832 879 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 C3orf36Q3SXR2 165 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 PRR31Q5SQ13 230 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 TMEM200BQ69YZ2 307 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 GRAMD4Q6IC98 578 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 TRMT10BQ6PF06 316 aaKnown RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 LILRA6Q6PI73 481 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 BMP8AQ7Z5Y6 402 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 SMAP1Q8IYB5 467 aaPredicted RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 ADGRG2Q8IZP9 1017 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 MIER2Q8N344 545 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 FBXO15Q8NCQ5 510 aaPredicted RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 DPF2Q92785 391 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 DYDC2Q96IM9 177 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 TNIP3Q96KP6 325 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 NUP88Q99567 741 aaPredicted RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.02□□□□□ -1.45
USP47-206ENST00000525367 SCOCQ9UIL1 159 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 DNM3Q9UQ16 869 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 PMF1-BGLAPU3KQ54 211 aa6.02□□□□□ -1.45
USP47-206ENST00000525367 A6NNZ2 444 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 H0Y858 1186 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 TMEM127O75204 238 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 PI3P19957 117 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 KCNQ1P51787 676 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 CD69Q07108 199 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 PPP3CAQ08209 521 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 FOXD4Q12950 439 aaPredicted RBP6.01□□□□□ -1.45
USP47-206ENST00000525367 DGKDQ16760 1214 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 FAM83BQ5T0W9 1011 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 FAM129CQ86XR2 697 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 CPXCR1Q8N123 301 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 ANKRD42Q8N9B4 389 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 GLB1L3Q8NCI6 653 aaPredicted RBP6.01□□□□□ -1.45
USP47-206ENST00000525367 FNIP1Q8TF40 1166 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 KCNN1Q92952 543 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 RAB24Q969Q5 203 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 RUNDC1Q96C34 613 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 HIST1H2AHQ96KK5 128 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 TAAR9Q96RI9 348 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 HIST1H2AJQ99878 128 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 CSRNP2Q9H175 543 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 NMRK2Q9NPI5 230 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 POLR3BQ9NW08 1133 aaPredicted RBP6.01□□□□□ -1.45
USP47-206ENST00000525367 FAM53CQ9NYF3 392 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 SWAP70Q9UH65 585 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 SAP30BPQ9UHR5 308 aaKnown RBP6.01□□□□□ -1.45
USP47-206ENST00000525367 FBXO9Q9UK97 447 aaPredicted RBP6.01□□□□□ -1.45
USP47-206ENST00000525367 SYNPO2Q9UMS6 1093 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 FAM50BQ9Y247 325 aa6.01□□□□□ -1.45
USP47-206ENST00000525367 A0A0G2JNJ9 132 aa6□□□□□ -1.45
USP47-206ENST00000525367 A0A1B0GTL3 188 aa6□□□□□ -1.45
USP47-206ENST00000525367 CCDC154A6NI56 674 aa6□□□□□ -1.45
USP47-206ENST00000525367 APAF1O14727 1248 aa6□□□□□ -1.45
USP47-206ENST00000525367 HTRA2O43464 458 aaPredicted RBP6□□□□□ -1.45
USP47-206ENST00000525367 CUTAO60888 179 aa6□□□□□ -1.45
USP47-206ENST00000525367 KLHL18O94889 574 aa6□□□□□ -1.45
USP47-206ENST00000525367 KRT1P04264 644 aa6□□□□□ -1.45
USP47-206ENST00000525367 MYL3P08590 195 aa6□□□□□ -1.45
USP47-206ENST00000525367 POU2F2P09086 479 aa6□□□□□ -1.45
USP47-206ENST00000525367 ZNF28P17035 718 aa6□□□□□ -1.45
USP47-206ENST00000525367 HSPA6P17066 643 aa6□□□□□ -1.45
USP47-206ENST00000525367 TRAPPC10P48553 1259 aa6□□□□□ -1.45
USP47-206ENST00000525367 MALLQ13021 153 aa6□□□□□ -1.45
USP47-206ENST00000525367 IL10RAQ13651 578 aa6□□□□□ -1.45
USP47-206ENST00000525367 ERAP2Q6P179 960 aa6□□□□□ -1.45
USP47-206ENST00000525367 DPP8Q6V1X1 898 aaPredicted RBP6□□□□□ -1.45
USP47-206ENST00000525367 LARP4Q71RC2 724 aaKnown RBP eCLIP6□□□□□ -1.45
USP47-206ENST00000525367 GRAMD1CQ8IYS0 662 aa6□□□□□ -1.45
USP47-206ENST00000525367 IFNL2Q8IZJ0 200 aa6□□□□□ -1.45
USP47-206ENST00000525367 TTLL6Q8N841 843 aa6□□□□□ -1.45
USP47-206ENST00000525367 PIK3C3Q8NEB9 887 aa6□□□□□ -1.45
USP47-206ENST00000525367 VPS37AQ8NEZ2 397 aa6□□□□□ -1.45
USP47-206ENST00000525367 PPP1R35Q8TAP8 253 aa6□□□□□ -1.45
USP47-206ENST00000525367 SSH1Q8WYL5 1049 aa6□□□□□ -1.45
USP47-206ENST00000525367 RIN2Q8WYP3 895 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms