RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 MAPK6Q16659 721 aa14.41□□□□□ -0.1
SWAP70-203ENST00000524817 RTN4RL1Q86UN2 441 aaPredicted RBP14.41□□□□□ -0.1
SWAP70-203ENST00000524817 CREBRFQ8IUR6 639 aa14.41□□□□□ -0.1
SWAP70-203ENST00000524817 ZBTB8OSQ8IWT0 167 aa14.41□□□□□ -0.1
SWAP70-203ENST00000524817 UNC80Q8N2C7 3258 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 TRIM49BA6NDI0 452 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 ZNF131P52739 623 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 MLLT1Q03111 559 aaPredicted RBP14.4□□□□□ -0.1
SWAP70-203ENST00000524817 TMEM192Q8IY95 271 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 NME8Q8N427 588 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 SCFD1Q8WVM8 642 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 HNRNPDLO14979 420 aaKnown RBP14.4□□□□□ -0.1
SWAP70-203ENST00000524817 CSPG5O95196 566 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 HOXD13P35453 343 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 AFF1P51825 1210 aaKnown RBP14.4□□□□□ -0.1
SWAP70-203ENST00000524817 SPAG1Q07617 926 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 PRPF4BQ13523 1007 aaKnown RBP14.4□□□□□ -0.1
SWAP70-203ENST00000524817 ZBTB41Q5SVQ8 909 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 FAM109BQ6ICB4 259 aaPredicted RBP14.4□□□□□ -0.1
SWAP70-203ENST00000524817 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 PYM1Q9BRP8 204 aaKnown RBP14.4□□□□□ -0.1
SWAP70-203ENST00000524817 KLK14Q9P0G3 267 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 NR2E3Q9Y5X4 410 aa14.4□□□□□ -0.1
SWAP70-203ENST00000524817 TSPAN1O60635 241 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 AKAP5P24588 427 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 HOXA11P31270 313 aaPredicted RBP14.39□□□□□ -0.11
SWAP70-203ENST00000524817 PRCPP42785 496 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 GATMP50440 423 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 DEFB103AP81534 67 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 DPCR1Q3MIW9 517 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 NT5DC1Q5TFE4 455 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 TMEM199Q8N511 208 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 CCDC155Q8N6L0 562 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 TIGD1Q96MW7 591 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 ARHGAP28Q9P2N2 729 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 TBX20Q9UMR3 447 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 MYO7AQ13402 2215 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 MBD3O95983 291 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 MAPTP10636 758 aaKnown RBP14.39□□□□□ -0.11
SWAP70-203ENST00000524817 FPGSQ05932 587 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 PPP2R5AQ15172 486 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 KANK3Q6NY19 840 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 LINC01599Q8WXQ3 324 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 FAM212AQ96EL1 285 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 SAAL1Q96ER3 474 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 HAPLN2Q9GZV7 340 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 KCND2Q9NZV8 630 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 GAS2O43903 313 aaKnown RBP14.39□□□□□ -0.11
SWAP70-203ENST00000524817 PMS1P54277 932 aaKnown RBP14.39□□□□□ -0.11
SWAP70-203ENST00000524817 STRN3Q13033 797 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 AMHR2Q16671 573 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 CHRDL2Q6WN34 429 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 TSHZ1Q6ZSZ6 1077 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 EXOC8Q8IYI6 725 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 RABGGTAQ92696 567 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 HCSTQ9UBK5 93 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 USP25Q9UHP3 1055 aa14.39□□□□□ -0.11
SWAP70-203ENST00000524817 COL6A3P12111 3177 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 FRMD3A2A2Y4 597 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 ASAP2O43150 1006 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 NPTXRO95502 500 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 CBWD1Q9BRT8 395 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 CACNG4Q9UBN1 327 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 SMC2O95347 1197 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 ACOT2P49753 483 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 NCKAP1LP55160 1127 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 SHHQ15465 462 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 SLC39A4Q6P5W5 647 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 ZNF410Q86VK4 478 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 CCDC34Q96HJ3 373 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 LRRC27Q9C0I9 530 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 NXF3Q9H4D5 531 aaKnown RBP14.38□□□□□ -0.11
SWAP70-203ENST00000524817 MAGEF1Q9HAY2 307 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 HOOK1Q9UJC3 728 aaKnown RBP14.38□□□□□ -0.11
SWAP70-203ENST00000524817 C5orf42Q9H799 3197 aa14.38□□□□□ -0.11
SWAP70-203ENST00000524817 SLC26A4O43511 780 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 SFPQP23246 707 aaKnown RBP eCLIP14.37□□□□□ -0.11
SWAP70-203ENST00000524817 LIG4P49917 911 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 CYP2J2P51589 502 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 KLHL40Q2TBA0 621 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 TRIM6Q9C030 488 aaPredicted RBP14.37□□□□□ -0.11
SWAP70-203ENST00000524817 FGFR1P11362 822 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 ZSCAN20P17040 1043 aaPredicted RBP14.37□□□□□ -0.11
SWAP70-203ENST00000524817 TNFSF9P41273 254 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 EHHADHQ08426 723 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 PAN2Q504Q3 1202 aaKnown RBP14.37□□□□□ -0.11
SWAP70-203ENST00000524817 PLEKHG4Q58EX7 1191 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 ATF7IP2Q5U623 682 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 UBE2OQ9C0C9 1292 aaKnown RBP14.37□□□□□ -0.11
SWAP70-203ENST00000524817 FZD8Q9H461 694 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 ERVK-5Q9HDB9 667 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 INPP5FQ9Y2H2 1132 aa14.37□□□□□ -0.11
SWAP70-203ENST00000524817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.36□□□□□ -0.11
SWAP70-203ENST00000524817 PVALEFA0A1B0GWK0 134 aa14.36□□□□□ -0.11
SWAP70-203ENST00000524817 RHOBTB3O94955 611 aa14.36□□□□□ -0.11
SWAP70-203ENST00000524817 SARSP49591 514 aaKnown RBP14.36□□□□□ -0.11
SWAP70-203ENST00000524817 RABGGTBP53611 331 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms