RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 PITPNM3Q9BZ71 974 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 INIPQ9NRY2 104 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 PNPLA7Q6ZV29 1317 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 MAP3K7O43318 606 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 CAMTA2O94983 1202 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ACSL3O95573 720 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 LMNAP02545 664 aaKnown RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 BRAFP15056 766 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 VARSP26640 1264 aaKnown RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 GRIA2P42262 883 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 GALK1P51570 392 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 SLC34A1Q06495 639 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ACVR2BQ13705 512 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 DCAF12L1Q5VU92 463 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 GLIS3Q8NEA6 775 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 C18orf8Q96DM3 657 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ZNF184Q99676 751 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 CENPKQ9BS16 269 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 SLCO1B3Q9NPD5 702 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ARHGEF38Q9NXL2 777 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ARPP21Q9UBL0 812 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 FAM205AQ6ZU69 1335 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 TAF1P21675 1872 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ANKRD63C9JTQ0 380 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 BOLA2-SMG1P6H3BVE0 249 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 PRPF3O43395 683 aaKnown RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ATP5HO75947 161 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 PSMG1O95456 288 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 KRT13P13646 458 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 RXRBP28702 533 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 CDK7P50613 346 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 PTENP60484 403 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 PTK2Q05397 1052 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 AP1B1Q10567 949 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 LRRC41Q15345 812 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ASIC2Q16515 512 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 TAF1BQ53T94 588 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 CENPPQ6IPU0 288 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ZNF571Q7Z3V5 609 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 WDR60Q8WVS4 1066 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 CADM1Q9BY67 442 aaKnown RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 STMN4Q9H169 189 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 ASCC2Q9H1I8 757 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-224ENST00000524126 CLIC5Q9NZA1 410 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 AIPL1Q9NZN9 384 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 TBK1Q9UHD2 729 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 STXBP5LQ9Y2K9 1186 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 TNKSO95271 1327 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 THSD7AQ9UPZ6 1657 aa10.92□□□□□ -0.66
SPIDR-224ENST00000524126 WTIPA6NIX2 430 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 IRS4O14654 1257 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 VIL1P09327 827 aaKnown RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 PLCG2P16885 1265 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 RASSF2P50749 326 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 DNAJC3Q13217 504 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 PPP2R5CQ13362 524 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 BTNL9Q6UXG8 535 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 NCCRP1Q6ZVX7 275 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 MARK2Q7KZI7 788 aaKnown RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 NT5DC3Q86UY8 548 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 ZBTB38Q8NAP3 1195 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 PPFIBP2Q8ND30 876 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 HELBQ8NG08 1087 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 CORO1BQ9BR76 489 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 CNNM2Q9H8M5 875 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 LRRC4BQ9NT99 713 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 DNAJC17Q9NVM6 304 aaKnown RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 STK32BQ9NY57 414 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 SPATA7Q9P0W8 599 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 ARMCX3Q9UH62 379 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 CNOT7Q9UIV1 285 aaKnown RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 TDRKHQ9Y2W6 561 aaKnown RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 PASKQ96RG2 1323 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 RNASEH1O60930 286 aaKnown RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 ALOX15P16050 662 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 MFSD5Q6N075 450 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 DTHD1Q6ZMT9 781 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 SATL1Q86VE3 508 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 SCUBE1Q8IWY4 988 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 STKLD1Q8NE28 680 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 SH3TC2Q8TF17 1288 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 MAGEB18Q96M61 343 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 PHF12Q96QT6 1004 aa10.91□□□□□ -0.66
SPIDR-224ENST00000524126 NIP7Q9Y221 180 aaKnown RBP eCLIP10.91□□□□□ -0.66
SPIDR-224ENST00000524126 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-224ENST00000524126 EYA4O95677 639 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 PYGMP11217 842 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 ACTN1P12814 892 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 PTPN4P29074 926 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 YARSP54577 528 aaKnown RBP10.9□□□□□ -0.66
SPIDR-224ENST00000524126 IZUMO2Q6UXV1 221 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 LRRC55Q6ZSA7 311 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 ZNF554Q86TJ5 538 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 TTLL11Q8NHH1 800 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 WDR66Q8TBY9 1149 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 TMEM109Q9BVC6 243 aa10.9□□□□□ -0.66
SPIDR-224ENST00000524126 OXCT2Q9BYC2 517 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms