RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 BMS1Q14692 1282 aaKnown RBP19.12■□□□□ 0.65
CCNC-213ENST00000523541 PPP2R5AQ15172 486 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 NOMO2Q5JPE7 1267 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 POTEGQ6S5H5 508 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 ASAP3Q8TDY4 903 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 MRPS27Q92552 414 aaKnown RBP19.12■□□□□ 0.65
CCNC-213ENST00000523541 CDCA3Q99618 268 aaPredicted RBP19.12■□□□□ 0.65
CCNC-213ENST00000523541 POLR3FQ9H1D9 316 aaPredicted RBP19.12■□□□□ 0.65
CCNC-213ENST00000523541 NGRNQ9NPE2 291 aaKnown RBP19.12■□□□□ 0.65
CCNC-213ENST00000523541 TLR9Q9NR96 1032 aa19.12■□□□□ 0.65
CCNC-213ENST00000523541 TSPAN1O60635 241 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 OFD1O75665 1012 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 GTF2F1P35269 517 aaKnown RBP eCLIP19.11■□□□□ 0.65
CCNC-213ENST00000523541 IRS1P35568 1242 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 NRIP1P48552 1158 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 MBTD1Q05BQ5 628 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 FAM187BQ17R55 369 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 PPP4R3CPQ6ZMV5 832 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 ZBTB8OSQ8IWT0 167 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 HACE1Q8IYU2 909 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 URGCPQ8TCY9 931 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 SNX29Q8TEQ0 813 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 KIFAP3Q92845 792 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 CSRNP2Q9H175 543 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 TLE6Q9H808 572 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 ENTPD7Q9NQZ7 604 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 PRMT7Q9NVM4 692 aaPredicted RBP19.11■□□□□ 0.65
CCNC-213ENST00000523541 KCNG1Q9UIX4 513 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 KIAA1024Q9UPX6 916 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 INPP5FQ9Y2H2 1132 aa19.11■□□□□ 0.65
CCNC-213ENST00000523541 A0A087WWV3 80 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 A0A1B0GUA9 196 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 GRXCR2A6NFK2 248 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 PBX3P40426 434 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 NAMPTP43490 491 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 ADAM15Q13444 863 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 AMHR2Q16671 573 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 UBXN11Q5T124 520 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 CDCA2Q69YH5 1023 aaPredicted RBP19.1■□□□□ 0.65
CCNC-213ENST00000523541 LPPQ93052 612 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 AK8Q96MA6 479 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 NT5C3AQ9H0P0 336 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 FZD8Q9H461 694 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 NCOR1O75376 2440 aa19.1■□□□□ 0.65
CCNC-213ENST00000523541 FSCN2O14926 492 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 INPPL1O15357 1258 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 LINC01565O15544 149 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 EYA4O95677 639 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 EFNA5P52803 228 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 RNASELQ05823 741 aaKnown RBP19.09■□□□□ 0.65
CCNC-213ENST00000523541 IL17AQ16552 155 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 HYIQ5T013 277 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 PLPP4Q5VZY2 271 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 AGMOQ6ZNB7 445 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 ADGRD2Q7Z7M1 963 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 SLC39A11Q8N1S5 342 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 EFHBQ8N7U6 833 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 IFT74Q96LB3 600 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 TIPINQ9BVW5 301 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 BHMT2Q9H2M3 363 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 RSAD1Q9HA92 442 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 DDX19AQ9NUU7 478 aaKnown RBP19.09■□□□□ 0.65
CCNC-213ENST00000523541 PCDHGC5Q9Y5F6 944 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 PLXNA4Q9HCM2 1894 aa19.09■□□□□ 0.65
CCNC-213ENST00000523541 BRWD1Q9NSI6 2320 aa19.08■□□□□ 0.65
CCNC-213ENST00000523541 ZMYM2Q9UBW7 1377 aa19.08■□□□□ 0.65
CCNC-213ENST00000523541 ATG2AQ2TAZ0 1938 aa19.08■□□□□ 0.65
CCNC-213ENST00000523541 PHLPP2Q6ZVD8 1323 aa19.08■□□□□ 0.65
CCNC-213ENST00000523541 LRRIQ4A6NIV6 560 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 ZC3H11AO75152 810 aaKnown RBP eCLIP19.08■□□□□ 0.64
CCNC-213ENST00000523541 ITGA4P13612 1032 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 ARF4P18085 180 aaPredicted RBP19.08■□□□□ 0.64
CCNC-213ENST00000523541 BCAR1P56945 870 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 ECM1Q16610 540 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 SLC27A1Q6PCB7 646 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 TMEM87AQ8NBN3 555 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 TMEM169Q96HH4 297 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 TCF25Q9BQ70 676 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 TMEM175Q9BSA9 504 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 TRIM6Q9C030 488 aaPredicted RBP19.08■□□□□ 0.64
CCNC-213ENST00000523541 GBP3Q9H0R5 595 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 C17orf75Q9HAS0 396 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 GPRC5CQ9NQ84 441 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 TBC1D13Q9NVG8 400 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 GIT1Q9Y2X7 761 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 BDP1A6H8Y1 2624 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 MYO7AQ13402 2215 aa19.08■□□□□ 0.64
CCNC-213ENST00000523541 ARID2Q68CP9 1835 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 PER2O15055 1255 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 ALDH2P05091 517 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 LTBRP36941 435 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 ERVFC1P60507 584 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 DLX2Q07687 328 aaPredicted RBP19.07■□□□□ 0.64
CCNC-213ENST00000523541 GIT2Q14161 759 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 MAPK6Q16659 721 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 MAEAQ7L5Y9 396 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 TMC7Q7Z402 723 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 FAM178BQ8IXR5 827 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 GJD3Q8N144 294 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 SMG8Q8ND04 991 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms