RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 SUCLA2Q9P2R7 463 aaPredicted RBP13.1□□□□□ -0.31
SDCBP-211ENST00000523441 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 NUMBLQ9Y6R0 609 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
SDCBP-211ENST00000523441 GOLGA8AA7E2F4 631 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 F8W810 466 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 ZBTB43O43298 467 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 LAMTOR5O43504 91 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 CD72P21854 359 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 CLK2P49760 499 aaKnown RBP13.09□□□□□ -0.31
SDCBP-211ENST00000523441 ATXN1P54253 815 aaKnown RBP13.09□□□□□ -0.31
SDCBP-211ENST00000523441 SETQ01105 290 aaPredicted RBP13.09□□□□□ -0.31
SDCBP-211ENST00000523441 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
SDCBP-211ENST00000523441 TSSK4Q6SA08 328 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 SUMF1Q8NBK3 374 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 PHKBQ93100 1093 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 PGBD4Q96DM1 585 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 RSAD1Q9HA92 442 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 CHST12Q9NRB3 414 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 RBM28Q9NW13 759 aaKnown RBP13.09□□□□□ -0.31
SDCBP-211ENST00000523441 DLGAP2Q9P1A6 1054 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 RALYQ9UKM9 306 aaKnown RBP13.09□□□□□ -0.31
SDCBP-211ENST00000523441 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
SDCBP-211ENST00000523441 BRPF3Q9ULD4 1205 aa13.09□□□□□ -0.31
SDCBP-211ENST00000523441 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 GAS7O60861 476 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 SOD2P04179 222 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 SKIP12755 728 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 LAMP2P13473 410 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 RPL17P18621 184 aaKnown RBP13.08□□□□□ -0.32
SDCBP-211ENST00000523441 GLUD2P49448 558 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 DNM2P50570 870 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 GPC5P78333 572 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 LPAL2Q16609 132 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 ST3GAL2Q16842 350 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 ELMSAN1Q6PJG2 1045 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 APOA5Q6Q788 366 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 AGMOQ6ZNB7 445 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 MAML2Q8IZL2 1156 aaPredicted RBP13.08□□□□□ -0.32
SDCBP-211ENST00000523441 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 RABGGTAQ92696 567 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 APOL6Q9BWW8 343 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 UNC45AQ9H3U1 944 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 EPS15L1Q9UBC2 864 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 POLIQ9UNA4 740 aa13.08□□□□□ -0.32
SDCBP-211ENST00000523441 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.32
SDCBP-211ENST00000523441 ACACBO00763 2458 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 MAP1BP46821 2468 aaKnown RBP13.07□□□□□ -0.32
SDCBP-211ENST00000523441 KLF18A0A0U1RQI7 1052 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 GAS2O43903 313 aaKnown RBP13.07□□□□□ -0.32
SDCBP-211ENST00000523441 LILRB3O75022 631 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 CYP3A4P08684 503 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 SRGAP2CP0DJJ0 459 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 RAB27AP51159 221 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 NTHL1P78549 312 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 HTR4Q13639 388 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 LRCH2Q5VUJ6 765 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 PLA2G4FQ68DD2 849 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 PHLDB3Q6NSJ2 640 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 PARM1Q6UWI2 310 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 MIER3Q7Z3K6 550 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
SDCBP-211ENST00000523441 ZNF707Q96C28 371 aaPredicted RBP13.07□□□□□ -0.32
SDCBP-211ENST00000523441 HERC2P3Q9BVR0 1158 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 BCO2Q9BYV7 579 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 MARCH5Q9NX47 278 aa13.07□□□□□ -0.32
SDCBP-211ENST00000523441 CACNA1GO43497 2377 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 MSH4O15457 936 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 FSHRP23945 695 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 CDC27P30260 824 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 GRASPQ7Z6J2 395 aaPredicted RBP13.06□□□□□ -0.32
SDCBP-211ENST00000523441 CMASQ8NFW8 434 aaPredicted RBP13.06□□□□□ -0.32
SDCBP-211ENST00000523441 FGF14Q92915 247 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 SECISBP2LQ93073 1101 aaKnown RBP13.06□□□□□ -0.32
SDCBP-211ENST00000523441 CCDC136Q96JN2 1154 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 MTA3Q9BTC8 594 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 TEKT3Q9BXF9 490 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 INO80BQ9C086 356 aaPredicted RBP13.06□□□□□ -0.32
SDCBP-211ENST00000523441 NT5C3AQ9H0P0 336 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 GLT8D2Q9H1C3 349 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 C6orf50Q9HD87 102 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
SDCBP-211ENST00000523441 GPR179Q6PRD1 2367 aa13.06□□□□□ -0.32
SDCBP-211ENST00000523441 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 FAM170BA6NMN3 283 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 hCG_1984214I3L0E3 225 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 TGM5O43548 720 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 ITGA4P13612 1032 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 ADD1P35611 737 aaKnown RBP13.05□□□□□ -0.32
SDCBP-211ENST00000523441 MLH1P40692 756 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
SDCBP-211ENST00000523441 FUT2Q10981 343 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 KIAA0319Q5VV43 1072 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
SDCBP-211ENST00000523441 ZNF713Q8N859 430 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms