RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TPTE2Q6XPS3 522 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 MAB21L3Q8N8X9 362 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 BBOF1Q8ND07 529 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 ATXN2LQ8WWM7 1075 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 TMEM237Q96Q45 408 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 HEMGNQ9BXL5 484 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 CNOT7Q9UIV1 285 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 NR2E1Q9Y466 385 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 UBR1Q8IWV7 1749 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 KIAA0391O15091 583 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 CLDN3O15551 220 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 CDH16O75309 829 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 AKAP3O75969 853 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 MAN1A1P33908 653 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 COILP38432 576 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 AUHQ13825 339 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 CTTNQ14247 550 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF268Q14587 947 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 COBLL1Q53SF7 1204 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 CFAP157Q5JU67 520 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 DUPD1Q68J44 220 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 SEPT14Q6ZU15 432 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 IRF2BP2Q7Z5L9 587 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 KIAA0825Q8IV33 1275 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 SERPINB12Q96P63 405 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 REEP2Q9BRK0 252 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 NYXQ9GZU5 481 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 SAYSD1Q9NPB0 183 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 PKD2L1Q9P0L9 805 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 LARSQ9P2J5 1176 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 SLC12A4Q9UP95 1085 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF148Q9UQR1 794 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 ATMINO43313 823 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-212ENST00000523387 KLRK1P26718 216 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 KAZNQ674X7 775 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 TAB3Q8N5C8 712 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-212ENST00000523387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSMD1-212ENST00000523387 NEDD1Q8NHV4 660 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF564Q8TBZ8 553 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-212ENST00000523387 CCDC127Q96BQ5 260 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 CFAP57Q96MR6 1250 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 AGPAT1Q99943 283 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 NUP85Q9BW27 656 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 ANO3Q9BYT9 981 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 WNT8AQ9H1J5 351 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 VCX3BQ9H321 246 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 EBF2Q9HAK2 575 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 VCX3AQ9NNX9 186 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 ZBTB21Q9ULJ3 1066 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.66□□□□□ -0.86
CSMD1-212ENST00000523387 CFAP69A5D8W1 941 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 BTNL10A8MVZ5 291 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 GGPS1O95749 300 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 ESRRAP11474 423 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-212ENST00000523387 ATP4AP20648 1035 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 NKX1-1Q15270 411 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-212ENST00000523387 RFX8Q6ZV50 586 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 LRRC57Q8N9N7 239 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 SNF8Q96H20 258 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 HOMER2Q9NSB8 354 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 ETAA1Q9NY74 926 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 C1orf167Q5SNV9 1468 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 FAM47DPA6NHR8 397 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 RARAP10276 462 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 GAP43P17677 238 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 KCNA3P22001 575 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 NT5C2P49902 561 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 CUL3Q13618 768 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 SPDYCQ5MJ68 293 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 PIGWQ7Z7B1 504 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 EXOC3L1Q86VI1 746 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF317Q96PQ6 595 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-212ENST00000523387 CYTH2Q99418 400 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 FGFBP2Q9BYJ0 223 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 CTNNAL1Q9UBT7 734 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 TMEM59LQ9UK28 342 aa9.66□□□□□ -0.86
CSMD1-212ENST00000523387 K7ENM7 598 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 HAUS5O94927 633 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 PLS3P13797 630 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ATF7P17544 494 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-212ENST00000523387 NMT1P30419 496 aaKnown RBP9.65□□□□□ -0.86
CSMD1-212ENST00000523387 FMO5P49326 533 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 RNASELQ05823 741 aaKnown RBP9.65□□□□□ -0.86
CSMD1-212ENST00000523387 TRAF1Q13077 416 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 MIS18BP1Q6P0N0 1132 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 CLEC10AQ8IUN9 316 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 C4orf33Q8N1A6 199 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ARHGEF26Q96DR7 871 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 HES6Q96HZ4 224 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ZSWIM1Q9BR11 485 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 RNPEPL1Q9HAU8 725 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 PARVGQ9HBI0 331 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 ERVK-5Q9HDB9 667 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 LOC102724428A0A0B4J2F2 783 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 PFASO15067 1338 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 UFL1O94874 794 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 CALB2P22676 271 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 SIK1P57059 783 aa9.65□□□□□ -0.86
CSMD1-212ENST00000523387 MFSD14BQ5SR56 506 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms