RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288		H0YC42	278 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	NDC80	O14777	642 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	HNRNPR	O43390	633 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SNX3	O60493	162 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	LPXN	O60711	386 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	LYN	P07948	512 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RARG	P13631	454 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RASA1	P20936	1047 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ETV3	P41162	512 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RASSF2	P50749	326 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PDE6C	P51160	858 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	TPD52	P55327	224 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ARHGAP4	P98171	946 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CLUL1	Q15846	466 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CWF19L2	Q2TBE0	894 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	FAM47C	Q5HY64	1035 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPOUT1	Q5T280	376 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	FAM171B	Q6P995	826 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PDXDC1	Q6P996	788 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SAPCD2	Q86UD0	394 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC51B	Q86UW2	128 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CABP7	Q86V35	215 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	AFG1L	Q8WV93	481 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	COX4I2	Q96KJ9	171 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RPRD1A	Q96P16	312 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	TDRD1	Q9BXT4	1180 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RBM38	Q9H0Z9	239 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SH2D4A	Q9H788	454 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	AS3MT	Q9HBK9	375 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPC25	Q9HBM1	224 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SCUBE2	Q9NQ36	999 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	BABAM1	Q9NWV8	329 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	STX18	Q9P2W9	335 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PRKAG2	Q9UGJ0	569 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PLAA	Q9Y263	795 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF609	O15014	1411 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAGEB6P1	A0A0J9YX57	407 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	BTBD18	B2RXH4	712 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SUN1	O94901	812 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	NDUFA10	O95299	355 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	KRT16	P08779	473 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ECHS1	P30084	290 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	HIBADH	P31937	336 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	GTF2H1	P32780	548 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	IL15	P40933	162 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SEC24C	P53992	1094 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC18A1	P54219	525 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CRB1	P82279	1406 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RELA	Q04206	551 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC34A1	Q06495	639 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	C19orf57	Q0VDD7	668 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	WTAP	Q15007	396 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	FXN	Q16595	210 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SKIDA1	Q1XH10	827 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	NAALADL2	Q58DX5	795 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	BTBD8	Q5XKL5	378 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	MFSD5	Q6N075	450 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CHST3	Q7LGC8	479 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	HAUS6	Q7Z4H7	955 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	FERMT3	Q86UX7	667 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAP7D3	Q8IWC1	876 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CPXCR1	Q8N123	301 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CPSF7	Q8N684	471 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	DDI1	Q8WTU0	396 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	FRS2	Q8WU20	508 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	EVI5L	Q96CN4	794 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	NMRK1	Q9NWW6	199 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	STK39	Q9UEW8	545 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZBTB21	Q9ULJ3	1066 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	GPC6	Q9Y625	555 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RBAK-RBAKDN	I3L0D1	243 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PEX1	O43933	1283 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ATP9A	O75110	1047 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	JRK	O75564	520 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ATP5B	P06576	529 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CDK4	P11802	303 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ATP1A3	P13637	1013 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ATIC	P31939	592 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	KRT6C	P48668	564 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	MXI1	P50539	228 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	POLG	P54098	1239 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RAD23B	P54727	409 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	RNASEL	Q05823	741 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SSRP1	Q08945	709 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SLC39A14	Q15043	492 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	EPHA7	Q15375	998 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	TCERG1L	Q5VWI1	586 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SNRNP48	Q6IEG0	339 aa	Known RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	PCGF5	Q86SE9	256 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPATA24	Q86W54	205 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ZNF354C	Q86Y25	554 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPATA5	Q8NB90	893 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SPATA4	Q8NEY3	305 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	ESR2	Q92731	530 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	CTRC	Q99895	268 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	SIKE1	Q9BRV8	207 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	TRIM55	Q9BYV6	548 aa		4.12	□□□□□ -1.75
FAM49B-225	ENST00000523288	MOV10	Q9HCE1	1003 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms