RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PPM1AP35813 382 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 ALDH7A1P49419 539 aaKnown RBP20.76■□□□□ 0.91
SPIDR-220ENST00000522900 FXR2P51116 673 aaKnown RBP eCLIP20.76■□□□□ 0.91
SPIDR-220ENST00000522900 KRT17Q04695 432 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 IL17AQ16552 155 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 DUSP6Q16828 381 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 TMEM173Q86WV6 379 aaPredicted RBP20.76■□□□□ 0.91
SPIDR-220ENST00000522900 ZNF280BQ86YH2 543 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 GJD3Q8N144 294 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 SMG8Q8ND04 991 aaKnown RBP20.76■□□□□ 0.91
SPIDR-220ENST00000522900 VN1R2Q8NFZ6 395 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 ERMNQ8TAM6 284 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 CD207Q9UJ71 328 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 BARX2Q9UMQ3 279 aaPredicted RBP20.76■□□□□ 0.91
SPIDR-220ENST00000522900 ARID2Q68CP9 1835 aa20.76■□□□□ 0.91
SPIDR-220ENST00000522900 B4GALT5O43286 388 aa20.75■□□□□ 0.91
SPIDR-220ENST00000522900 MCTP1Q6DN14 999 aa20.75■□□□□ 0.91
SPIDR-220ENST00000522900 PDE12Q6L8Q7 609 aaKnown RBP20.75■□□□□ 0.91
SPIDR-220ENST00000522900 TMC7Q7Z402 723 aa20.75■□□□□ 0.91
SPIDR-220ENST00000522900 BCL7CQ8WUZ0 217 aaPredicted RBP20.75■□□□□ 0.91
SPIDR-220ENST00000522900 RNF39Q9H2S5 420 aa20.75■□□□□ 0.91
SPIDR-220ENST00000522900 POLD4Q9HCU8 107 aa20.75■□□□□ 0.91
SPIDR-220ENST00000522900 ENTPD7Q9NQZ7 604 aa20.75■□□□□ 0.91
SPIDR-220ENST00000522900 DNAJB4Q9UDY4 337 aa20.75■□□□□ 0.91
SPIDR-220ENST00000522900 LRWD1Q9UFC0 647 aa20.75■□□□□ 0.91
SPIDR-220ENST00000522900 DDHD2O94830 711 aa20.74■□□□□ 0.91
SPIDR-220ENST00000522900 GALTP07902 379 aa20.74■□□□□ 0.91
SPIDR-220ENST00000522900 ARF4P18085 180 aaPredicted RBP20.74■□□□□ 0.91
SPIDR-220ENST00000522900 NCLP19338 710 aaKnown RBP20.74■□□□□ 0.91
SPIDR-220ENST00000522900 AXLP30530 894 aa20.74■□□□□ 0.91
SPIDR-220ENST00000522900 CCT6AP40227 531 aaKnown RBP20.74■□□□□ 0.91
SPIDR-220ENST00000522900 PADI6Q6TGC4 694 aa20.74■□□□□ 0.91
SPIDR-220ENST00000522900 GBP3Q9H0R5 595 aa20.74■□□□□ 0.91
SPIDR-220ENST00000522900 RSAD1Q9HA92 442 aa20.74■□□□□ 0.91
SPIDR-220ENST00000522900 HES2Q9Y543 173 aa20.74■□□□□ 0.91
SPIDR-220ENST00000522900 IPPQ9Y573 584 aa20.74■□□□□ 0.91
SPIDR-220ENST00000522900 ARHGEF35A5YM69 484 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 LRRIQ4A6NIV6 560 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 PP2D1A8MPX8 630 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 CYP11B2P19099 503 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 SSTR3P32745 418 aaPredicted RBP20.73■□□□□ 0.91
SPIDR-220ENST00000522900 SLC11A1P49279 550 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 RNASELQ05823 741 aaKnown RBP20.73■□□□□ 0.91
SPIDR-220ENST00000522900 PDIA5Q14554 519 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 SMAD2Q15796 467 aaKnown RBP20.73■□□□□ 0.91
SPIDR-220ENST00000522900 NOTUMQ6P988 496 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 CDR2LQ86X02 465 aaPredicted RBP20.73■□□□□ 0.91
SPIDR-220ENST00000522900 BSNDQ8WZ55 320 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 NFKBIZQ9BYH8 718 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 CSRNP2Q9H175 543 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 NGRNQ9NPE2 291 aaKnown RBP20.73■□□□□ 0.91
SPIDR-220ENST00000522900 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.73■□□□□ 0.91
SPIDR-220ENST00000522900 FAM50BQ9Y247 325 aa20.73■□□□□ 0.91
SPIDR-220ENST00000522900 EYA4O95677 639 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 POMCP01189 267 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 ITGA4P13612 1032 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 CDC25AP30304 524 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 MCM2P49736 904 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 ZP2Q05996 745 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 NCBP1Q09161 790 aaKnown RBP20.72■□□□□ 0.91
SPIDR-220ENST00000522900 SMAD4Q13485 552 aaKnown RBP20.72■□□□□ 0.91
SPIDR-220ENST00000522900 KCNC3Q14003 757 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 PCBP1Q15365 356 aaKnown RBP eCLIP20.72■□□□□ 0.91
SPIDR-220ENST00000522900 MRPL43Q8N983 215 aaKnown RBP20.72■□□□□ 0.91
SPIDR-220ENST00000522900 IGSF22Q8N9C0 903 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 MCPH1Q8NEM0 835 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 RSPH1Q8WYR4 309 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 IGSF21Q96ID5 467 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 CDCA3Q99618 268 aaPredicted RBP20.72■□□□□ 0.91
SPIDR-220ENST00000522900 MIOSQ9NXC5 875 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 KIAA1024Q9UPX6 916 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 KIF3AQ9Y496 699 aa20.72■□□□□ 0.91
SPIDR-220ENST00000522900 C2orf71A6NGG8 1288 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 TTLL13PA6NNM8 815 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 CXCL14O95715 111 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 MUTP22033 750 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 COASYQ13057 564 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 HAUS3Q68CZ6 603 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 LLGL2Q6P1M3 1020 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 ADHFE1Q8IWW8 467 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 VPS52Q8N1B4 723 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 CNNM3Q8NE01 707 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 URGCPQ8TCY9 931 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 AUTS2Q8WXX7 1259 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 TMEM169Q96HH4 297 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 VN1R3Q9BXE9 311 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 BHMT2Q9H2M3 363 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 DDX19AQ9NUU7 478 aaKnown RBP20.71■□□□□ 0.91
SPIDR-220ENST00000522900 USP20Q9Y2K6 914 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 CNTNAP2Q9UHC6 1331 aa20.71■□□□□ 0.91
SPIDR-220ENST00000522900 C19orf67A6NJJ6 358 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 H3BQV1 296 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 SMC1AQ14683 1233 aaKnown RBP20.7■□□□□ 0.9
SPIDR-220ENST00000522900 CDCA2Q69YH5 1023 aaPredicted RBP20.7■□□□□ 0.9
SPIDR-220ENST00000522900 DDX53Q86TM3 631 aaKnown RBP20.7■□□□□ 0.9
SPIDR-220ENST00000522900 SMRP1Q8NCR6 262 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 SNX29Q8TEQ0 813 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 CCDC51Q96ER9 411 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 GAD1Q99259 594 aa20.7■□□□□ 0.9
SPIDR-220ENST00000522900 MMTAG2Q9BU76 263 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms