RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CATSPER4Q7RTX7 472 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 MYOCDQ8IZQ8 938 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 USP38Q8NB14 1042 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 PRKAG2Q9UGJ0 569 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 SYCE3A1L190 88 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 ACKR2O00590 384 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 NBNO60934 754 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 SFPQP23246 707 aaKnown RBP eCLIP26.55■■□□□ 1.844e-6■■□□□ 12.8
PVT1-212ENST00000521951 PRCPP42785 496 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 BMT2Q1RMZ1 405 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 COBLL1Q53SF7 1204 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 TSHZ1Q6ZSZ6 1077 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 MAP4K3Q8IVH8 894 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 ACCSQ96QU6 501 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 ST3GAL5Q9UNP4 418 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 USP20Q9Y2K6 914 aa26.55■■□□□ 1.84
PVT1-212ENST00000521951 PARNO95453 639 aaKnown RBP26.54■■□□□ 1.84
PVT1-212ENST00000521951 CD52P31358 61 aa26.54■■□□□ 1.84
PVT1-212ENST00000521951 PCBP1Q15365 356 aaKnown RBP eCLIP26.54■■□□□ 1.84
PVT1-212ENST00000521951 NELFCDQ8IXH7 590 aa26.54■■□□□ 1.84
PVT1-212ENST00000521951 GUF1Q8N442 669 aaKnown RBP26.54■■□□□ 1.84
PVT1-212ENST00000521951 PRIMPOLQ96LW4 560 aa26.54■■□□□ 1.84
PVT1-212ENST00000521951 PADI3Q9ULW8 664 aa26.54■■□□□ 1.84
PVT1-212ENST00000521951 UBE4BO95155 1302 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 TTLL13PA6NNM8 815 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 B4GALT5O43286 388 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 ERLIN2O94905 339 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 CD44P16070 742 aaKnown RBP26.53■■□□□ 1.84
PVT1-212ENST00000521951 MFSD5Q6N075 450 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 ADSSL1Q8N142 457 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 GZF1Q9H116 711 aaPredicted RBP26.53■■□□□ 1.84
PVT1-212ENST00000521951 ERVK-5Q9HDB9 667 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 PCDH10Q9P2E7 1040 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 TET1Q8NFU7 2136 aa26.53■■□□□ 1.84
PVT1-212ENST00000521951 PPP1R3GB7ZBB8 358 aa26.52■■□□□ 1.84
PVT1-212ENST00000521951 GPR182O15218 404 aa26.52■■□□□ 1.84
PVT1-212ENST00000521951 TSPAN1O60635 241 aa26.52■■□□□ 1.84
PVT1-212ENST00000521951 NFX1Q12986 1120 aaKnown RBP26.52■■□□□ 1.84
PVT1-212ENST00000521951 PAK2Q13177 524 aa26.52■■□□□ 1.84
PVT1-212ENST00000521951 PRPF4BQ13523 1007 aaKnown RBP26.52■■□□□ 1.84
PVT1-212ENST00000521951 IKZF4Q9H2S9 585 aa26.52■■□□□ 1.84
PVT1-212ENST00000521951 TMEM206Q9H813 350 aa26.52■■□□□ 1.84
PVT1-212ENST00000521951 EXOC7Q9UPT5 735 aa26.52■■□□□ 1.84
PVT1-212ENST00000521951 KIF20AO95235 890 aa26.51■■□□□ 1.83
PVT1-212ENST00000521951 DPCR1Q3MIW9 517 aa26.51■■□□□ 1.83
PVT1-212ENST00000521951 SYCP3Q8IZU3 236 aa26.51■■□□□ 1.83
PVT1-212ENST00000521951 MLKLQ8NB16 471 aa26.51■■□□□ 1.83
PVT1-212ENST00000521951 TARS2Q9BW92 718 aaKnown RBP26.51■■□□□ 1.83
PVT1-212ENST00000521951 MRPL4Q9BYD3 311 aaKnown RBP26.51■■□□□ 1.83
PVT1-212ENST00000521951 ZMYM2Q9UBW7 1377 aa26.51■■□□□ 1.83
PVT1-212ENST00000521951 CXCL10P02778 98 aa26.5■■□□□ 1.83
PVT1-212ENST00000521951 ARF4P18085 180 aaPredicted RBP26.5■■□□□ 1.83
PVT1-212ENST00000521951 HOXA11P31270 313 aaPredicted RBP26.5■■□□□ 1.83
PVT1-212ENST00000521951 RFC2P35250 354 aa26.5■■□□□ 1.83
PVT1-212ENST00000521951 TYRO3Q06418 890 aa26.5■■□□□ 1.83
PVT1-212ENST00000521951 KNOP1Q1ED39 458 aaKnown RBP26.5■■□□□ 1.83
PVT1-212ENST00000521951 TMEM199Q8N511 208 aa26.5■■□□□ 1.83
PVT1-212ENST00000521951 BICD1Q96G01 975 aa26.5■■□□□ 1.83
PVT1-212ENST00000521951 CPB2Q96IY4 423 aa26.5■■□□□ 1.83
PVT1-212ENST00000521951 ACO2Q99798 780 aaKnown RBP26.5■■□□□ 1.83
PVT1-212ENST00000521951 AGPAT5Q9NUQ2 364 aa26.5■■□□□ 1.83
PVT1-212ENST00000521951 CNTNAP2Q9UHC6 1331 aa26.5■■□□□ 1.83
PVT1-212ENST00000521951 PIGRP01833 764 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 SYN1P17600 705 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 STIM1Q13586 685 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 STX1AQ16623 288 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 PLEKHG4Q58EX7 1191 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 DEFB128Q7Z7B8 93 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 FUCA2Q9BTY2 467 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 IFIH1Q9BYX4 1025 aaKnown RBP26.49■■□□□ 1.83
PVT1-212ENST00000521951 KCTD10Q9H3F6 313 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 ANO10Q9NW15 660 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 ZMYND8Q9ULU4 1186 aaPredicted RBP26.49■■□□□ 1.83
PVT1-212ENST00000521951 ANKRD63C9JTQ0 380 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 AXLP30530 894 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 PPP1R2P41236 205 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 NCBP1Q09161 790 aaKnown RBP26.49■■□□□ 1.83
PVT1-212ENST00000521951 TMEM132AQ24JP5 1023 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 ZPBP2Q6X784 338 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 VWCEQ96DN2 955 aa26.49■■□□□ 1.83
PVT1-212ENST00000521951 HNRNPDLO14979 420 aaKnown RBP26.48■■□□□ 1.83
PVT1-212ENST00000521951 TGFB1I1O43294 461 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 CCDC192P0DO97 292 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 CSF2RAP15509 400 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 LIG4P49917 911 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 ATF7IP2Q5U623 682 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 KLHL10Q6JEL2 608 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 SLC39A4Q6P5W5 647 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 DBF4BQ8NFT6 615 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 BADQ92934 168 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 DHTKD1Q96HY7 919 aaPredicted RBP26.48■■□□□ 1.83
PVT1-212ENST00000521951 GBP3Q9H0R5 595 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 TMX1Q9H3N1 280 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 SEMA6BQ9H3T3 888 aa26.48■■□□□ 1.83
PVT1-212ENST00000521951 PIN4Q9Y237 131 aaKnown RBP26.48■■□□□ 1.83
PVT1-212ENST00000521951 LTBP2Q14767 1821 aa26.47■■□□□ 1.83
PVT1-212ENST00000521951 A0A1B0GUA9 196 aa26.47■■□□□ 1.83
PVT1-212ENST00000521951 TISP43B9A030 160 aa26.47■■□□□ 1.83
PVT1-212ENST00000521951 CDR2LQ86X02 465 aaPredicted RBP26.47■■□□□ 1.83
PVT1-212ENST00000521951 SEPT8Q92599 483 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms