RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RELNP78509 3460 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 KDM3AQ9Y4C1 1321 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 SPAARA0A1B0GVQ0 90 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 REC8O95072 547 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 TGFB3P10600 412 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 KLRC2P26717 231 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 MPLP40238 635 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 POLGP54098 1239 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 FGD1P98174 961 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 PPFIA1Q13136 1202 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 SEMA3FQ13275 785 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 OS9Q13438 667 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 GIT2Q14161 759 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 IER5Q5VY09 327 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 KCNV1Q6PIU1 500 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 CYP26C1Q6V0L0 522 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 CEP68Q76N32 757 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 DDX53Q86TM3 631 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 LRRC43Q8N309 656 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 TMEM87AQ8NBN3 555 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 MDM1Q8TC05 714 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 SMG7Q92540 1137 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 DNAJC2Q99543 621 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 LMAN1LQ9HAT1 526 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 JADE2Q9NQC1 790 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 NDRG2Q9UN36 371 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 STX8Q9UNK0 236 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 COL6A6A6NMZ7 2263 aa8.37□□□□□ -1.07
CTNNA1-227ENST00000521387 ITPR3Q14573 2671 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 CCDC171Q6TFL3 1326 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 DOPEY2Q9Y3R5 2298 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 OPLAHO14841 1288 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 PAPSS2O95340 614 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 MYCLP12524 364 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 PFKPQ01813 784 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 UBE3CQ15386 1083 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 WDR44Q5JSH3 913 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 DAB2IPQ5VWQ8 1189 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 PCSK4Q6UW60 755 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 METTL7BQ6UX53 244 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 CYFIP1Q7L576 1253 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 TMEM169Q96HH4 297 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 IGSF21Q96ID5 467 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 PLA2G2FQ9BZM2 168 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 NT5C3AQ9H0P0 336 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 IL25Q9H293 177 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 CPVLQ9H3G5 476 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 VPS45Q9NRW7 570 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 ST3GAL5Q9UNP4 418 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 PCDHGA10Q9Y5H3 936 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 CREBBPQ92793 2442 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 PLXNB3Q9ULL4 1909 aa8.36□□□□□ -1.07
CTNNA1-227ENST00000521387 TTC41PQ6P2S7 1318 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 LNP1A1A4G5 178 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 DENND3A2RUS2 1198 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 NOP56O00567 594 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 NRG2O14511 850 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 CHRNB1P11230 501 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 MCM4P33991 863 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 BMS1Q14692 1282 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 PPP2R5DQ14738 602 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 GIMAP6Q6P9H5 292 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 RAB44Q7Z6P3 723 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 AACSQ86V21 672 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 WDR5BQ86VZ2 330 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 ERC1Q8IUD2 1116 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 CLASRPQ8N2M8 674 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 SPATA18Q8TC71 538 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 KXD1Q9BQD3 176 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 IER2Q9BTL4 223 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 MAF1Q9H063 256 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 CCDC86Q9H6F5 360 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 KCNK4Q9NYG8 393 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 PNMA2Q9UL42 364 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 ZNF215Q9UL58 517 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 PCDHGA5Q9Y5G8 931 aa8.35□□□□□ -1.07
CTNNA1-227ENST00000521387 C2CD3Q4AC94 2353 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 ATMQ13315 3056 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 MGAQ8IWI9 3026 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 B4GALT3O60512 393 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 NTRK1P04629 796 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 SPATA31D3P0C874 917 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 HSPD1P10809 573 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 MARK3P27448 753 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 FAM193AP78312 1265 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 IGBP1P78318 339 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 NTHL1P78549 312 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 PGM5Q15124 567 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 SPATA31D4Q6ZUB0 917 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 NYAP1Q6ZVC0 841 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 CACNA2D4Q7Z3S7 1137 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 FAM228AQ86W67 206 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 ADAMTS10Q9H324 1103 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 CDH7Q9ULB5 785 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 MRPS17Q9Y2R5 130 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 ZFP37Q9Y6Q3 630 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 DOCK5Q9H7D0 1870 aa8.34□□□□□ -1.07
CTNNA1-227ENST00000521387 MYH7P12883 1935 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 SPATA31C2B4DYI2 1134 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms