RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 STK24Q9Y6E0 443 aa18.93■□□□□ 0.62
SQLE-205ENST00000521232 CARNS1A5YM72 827 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 TBX10O75333 385 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 CYP11B2P19099 503 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 NCLP19338 710 aaKnown RBP18.92■□□□□ 0.62
SQLE-205ENST00000521232 PRPHP41219 470 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 RILPL1Q5EBL4 403 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 MCTP1Q6DN14 999 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 PADI6Q6TGC4 694 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 MAEAQ7L5Y9 396 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 RAB34Q9BZG1 259 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 NRDE2Q9H7Z3 1164 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 NGRNQ9NPE2 291 aaKnown RBP18.92■□□□□ 0.62
SQLE-205ENST00000521232 GPRC5CQ9NQ84 441 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 TBC1D13Q9NVG8 400 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 FAM50BQ9Y247 325 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.92■□□□□ 0.62
SQLE-205ENST00000521232 CNTNAP2Q9UHC6 1331 aa18.92■□□□□ 0.62
SQLE-205ENST00000521232 H3BQV1 296 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 CCT6AP40227 531 aaKnown RBP18.91■□□□□ 0.62
SQLE-205ENST00000521232 IL17AQ16552 155 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 NOTUMQ6P988 496 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 SMG8Q8ND04 991 aaKnown RBP18.91■□□□□ 0.62
SQLE-205ENST00000521232 MSLNLQ96KJ4 702 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 CDCA3Q99618 268 aaPredicted RBP18.91■□□□□ 0.62
SQLE-205ENST00000521232 TCF25Q9BQ70 676 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 CSRNP2Q9H175 543 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 RSAD1Q9HA92 442 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 CD320Q9NPF0 282 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 UBN1Q9NPG3 1134 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 CLEC1BQ9P126 229 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 SMC3Q9UQE7 1217 aa18.91■□□□□ 0.62
SQLE-205ENST00000521232 FSD2A1L4K1 749 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 ARHGEF35A5YM69 484 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 NT5C1B-RDH14C9J2C7 533 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 PER2O15055 1255 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 GALTP07902 379 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 ARF4P18085 180 aaPredicted RBP18.9■□□□□ 0.62
SQLE-205ENST00000521232 NDUFV1P49821 464 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 DUSP6Q16828 381 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 DTHD1Q6ZMT9 781 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 CPB2Q96IY4 423 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 EIF2AQ9BY44 585 aaKnown RBP18.9■□□□□ 0.62
SQLE-205ENST00000521232 KANSL3Q9P2N6 904 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 CD207Q9UJ71 328 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 KIAA1024Q9UPX6 916 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 INPP5FQ9Y2H2 1132 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 IPPQ9Y573 584 aa18.9■□□□□ 0.62
SQLE-205ENST00000521232 A0A1B0GUA9 196 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 MBTPS2O43462 519 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 ZC3H11AO75152 810 aaKnown RBP eCLIP18.89■□□□□ 0.61
SQLE-205ENST00000521232 EYA4O95677 639 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 GLP2RO95838 553 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 ITGA4P13612 1032 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 AFF1P51825 1210 aaKnown RBP18.89■□□□□ 0.61
SQLE-205ENST00000521232 RNASELQ05823 741 aaKnown RBP18.89■□□□□ 0.61
SQLE-205ENST00000521232 COASYQ13057 564 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 SMAD2Q15796 467 aaKnown RBP18.89■□□□□ 0.61
SQLE-205ENST00000521232 PLPP4Q5VZY2 271 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 LARP1BQ659C4 914 aaKnown RBP18.89■□□□□ 0.61
SQLE-205ENST00000521232 CDCA2Q69YH5 1023 aaPredicted RBP18.89■□□□□ 0.61
SQLE-205ENST00000521232 TMC7Q7Z402 723 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 ZNF280BQ86YH2 543 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 GJD3Q8N144 294 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 URGCPQ8TCY9 931 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 SNX29Q8TEQ0 813 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 TMEM169Q96HH4 297 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 PRIMPOLQ96LW4 560 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 BACH2Q9BYV9 841 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 FZD8Q9H461 694 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 ENTPD7Q9NQZ7 604 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 PRKAG3Q9UGI9 489 aa18.89■□□□□ 0.61
SQLE-205ENST00000521232 LRRIQ4A6NIV6 560 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 HIDE1A8MVS5 230 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 INPPL1O15357 1258 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 B4GALT5O43286 388 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 DDHD2O94830 711 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 ATP2C1P98194 919 aaPredicted RBP18.88■□□□□ 0.61
SQLE-205ENST00000521232 SMAD4Q13485 552 aaKnown RBP18.88■□□□□ 0.61
SQLE-205ENST00000521232 CUL4AQ13619 759 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 KCNC3Q14003 757 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 CLUL1Q15846 466 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 FAM187BQ17R55 369 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 KRT79Q5XKE5 535 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 TMEM184AQ6ZMB5 413 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 PPP4R3CPQ6ZMV5 832 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 TMEM173Q86WV6 379 aaPredicted RBP18.88■□□□□ 0.61
SQLE-205ENST00000521232 MRPL43Q8N983 215 aaKnown RBP18.88■□□□□ 0.61
SQLE-205ENST00000521232 IGSF21Q96ID5 467 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 BHMT2Q9H2M3 363 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 DDX19AQ9NUU7 478 aaKnown RBP18.88■□□□□ 0.61
SQLE-205ENST00000521232 PRMT7Q9NVM4 692 aaPredicted RBP18.88■□□□□ 0.61
SQLE-205ENST00000521232 DNAJB4Q9UDY4 337 aa18.88■□□□□ 0.61
SQLE-205ENST00000521232 B4GALT3O60512 393 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 ALDH2P05091 517 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 NAMPTP43490 491 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 SLC11A1P49279 550 aa18.87■□□□□ 0.61
SQLE-205ENST00000521232 SMC1AQ14683 1233 aaKnown RBP18.87■□□□□ 0.61
SQLE-205ENST00000521232 SLC27A1Q6PCB7 646 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms