RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 RARRES1P49788 294 aa17.6■□□□□ 0.41
CLN8-205ENST00000520991 PTENP60484 403 aa17.6■□□□□ 0.41
CLN8-205ENST00000520991 ANKRD54Q6NXT1 300 aa17.6■□□□□ 0.41
CLN8-205ENST00000520991 TMEM184AQ6ZMB5 413 aa17.6■□□□□ 0.41
CLN8-205ENST00000520991 AGMOQ6ZNB7 445 aa17.6■□□□□ 0.41
CLN8-205ENST00000520991 TMEM173Q86WV6 379 aaPredicted RBP17.6■□□□□ 0.41
CLN8-205ENST00000520991 VPS52Q8N1B4 723 aa17.6■□□□□ 0.41
CLN8-205ENST00000520991 MRPL43Q8N983 215 aaKnown RBP17.6■□□□□ 0.41
CLN8-205ENST00000520991 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
CLN8-205ENST00000520991 A0A087WWV3 80 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.59■□□□□ 0.41
CLN8-205ENST00000520991 C2orf71A6NGG8 1288 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 TSPAN1O60635 241 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 USO1O60763 962 aaKnown RBP17.59■□□□□ 0.41
CLN8-205ENST00000520991 CXCL14O95715 111 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 GALTP07902 379 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 AXLP30530 894 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 RBM25P49756 843 aaKnown RBP17.59■□□□□ 0.41
CLN8-205ENST00000520991 CAPSQ13938 189 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 ZNF174Q15697 407 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 UBXN11Q5T124 520 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 NOTUMQ6P988 496 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 MRPL10Q7Z7H8 261 aaKnown RBP17.59■□□□□ 0.41
CLN8-205ENST00000520991 RNF135Q8IUD6 432 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 CNNM3Q8NE01 707 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 ASAP3Q8TDY4 903 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 CCDC51Q96ER9 411 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 IGSF21Q96ID5 467 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 FAM193BQ96PV7 902 aaPredicted RBP17.59■□□□□ 0.41
CLN8-205ENST00000520991 APOL5Q9BWW9 433 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 PHF7Q9BWX1 381 aaPredicted RBP17.59■□□□□ 0.41
CLN8-205ENST00000520991 POLR3FQ9H1D9 316 aaPredicted RBP17.59■□□□□ 0.41
CLN8-205ENST00000520991 TUFT1Q9NNX1 390 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 KANSL3Q9P2N6 904 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 DNAJB4Q9UDY4 337 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 MUTYHQ9UIF7 546 aa17.59■□□□□ 0.41
CLN8-205ENST00000520991 OR52Z1P0C646 297 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 XRCC6P12956 609 aaKnown RBP eCLIP17.58■□□□□ 0.47e-9■■■■■ 47.1
CLN8-205ENST00000520991 ITGA4P13612 1032 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 HOXB8P17481 243 aaPredicted RBP17.58■□□□□ 0.4
CLN8-205ENST00000520991 NCLP19338 710 aaKnown RBP17.58■□□□□ 0.4
CLN8-205ENST00000520991 ARL2P36404 184 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 SLC11A1P49279 550 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 POU5F1BQ06416 359 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 ORC2Q13416 577 aaPredicted RBP17.58■□□□□ 0.4
CLN8-205ENST00000520991 KCNC3Q14003 757 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 C8orf34Q49A92 452 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 DDX53Q86TM3 631 aaKnown RBP17.58■□□□□ 0.4
CLN8-205ENST00000520991 ZNF280BQ86YH2 543 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 FBXO18Q8NFZ0 1043 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 ERMNQ8TAM6 284 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 SUSD6Q92537 303 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 CASP10Q92851 521 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 CPB2Q96IY4 423 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 RPGRIP1Q96KN7 1286 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 TRIM6Q9C030 488 aaPredicted RBP17.58■□□□□ 0.4
CLN8-205ENST00000520991 ZBP1Q9H171 429 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 UBN1Q9NPG3 1134 aa17.58■□□□□ 0.4
CLN8-205ENST00000520991 POMCP01189 267 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 SPATA31C1P0DKV0 1188 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 GLRA2P23416 452 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 MBTD1Q05BQ5 628 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 HERC4Q5GLZ8 1057 aaPredicted RBP17.57■□□□□ 0.4
CLN8-205ENST00000520991 TTC38Q5R3I4 469 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 MAEAQ7L5Y9 396 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 CATSPER3Q86XQ3 398 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 IFNLR1Q8IU57 520 aaPredicted RBP17.57■□□□□ 0.4
CLN8-205ENST00000520991 NOSTRINQ8IVI9 506 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 HACE1Q8IYU2 909 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 BCL7CQ8WUZ0 217 aaPredicted RBP17.57■□□□□ 0.4
CLN8-205ENST00000520991 AUTS2Q8WXX7 1259 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 NACC1Q96RE7 527 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 KIF2CQ99661 725 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 POLR3CQ9BUI4 534 aaPredicted RBP17.57■□□□□ 0.4
CLN8-205ENST00000520991 EIF2AQ9BY44 585 aaKnown RBP17.57■□□□□ 0.4
CLN8-205ENST00000520991 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
CLN8-205ENST00000520991 IPPQ9Y573 584 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 HCFC2Q9Y5Z7 792 aa17.57■□□□□ 0.4
CLN8-205ENST00000520991 LRRIQ4A6NIV6 560 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 LOC730098B7Z3J9 87 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 CLASP2O75122 1294 aaKnown RBP17.56■□□□□ 0.4
CLN8-205ENST00000520991 MED24O75448 989 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 CTSAP10619 480 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 GIT2Q14161 759 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 CBX2Q14781 532 aaPredicted RBP17.56■□□□□ 0.4
CLN8-205ENST00000520991 SYCE2Q6PIF2 218 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 SMG8Q8ND04 991 aaKnown RBP17.56■□□□□ 0.4
CLN8-205ENST00000520991 MCPH1Q8NEM0 835 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 FAM122AQ96E09 287 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 TMEM175Q9BSA9 504 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 NFKBIZQ9BYH8 718 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 CSRNP2Q9H175 543 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 S1PR5Q9H228 398 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 STK39Q9UEW8 545 aa17.56■□□□□ 0.4
CLN8-205ENST00000520991 DBR1Q9UK59 544 aaKnown RBP17.56■□□□□ 0.4
CLN8-205ENST00000520991 ARHGEF35A5YM69 484 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 B4GALT3O60512 393 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 DDHD2O94830 711 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 ALDH2P05091 517 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms