RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 PTENP60484 403 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 ORC2Q13416 577 aaPredicted RBP11.69□□□□□ -0.54
EXTL3-208ENST00000520940 TFDP1Q14186 410 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 PCBP1Q15365 356 aaKnown RBP eCLIP11.69□□□□□ -0.54
EXTL3-208ENST00000520940 UBXN11Q5T124 520 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 LLGL2Q6P1M3 1020 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 TMEM184AQ6ZMB5 413 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 MRPL10Q7Z7H8 261 aaKnown RBP11.69□□□□□ -0.54
EXTL3-208ENST00000520940 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
EXTL3-208ENST00000520940 FBXO18Q8NFZ0 1043 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 PIGOQ8TEQ8 1089 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 SUSD6Q92537 303 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 CCDC51Q96ER9 411 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 GBP3Q9H0R5 595 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 POLR3FQ9H1D9 316 aaPredicted RBP11.69□□□□□ -0.54
EXTL3-208ENST00000520940 NRDE2Q9H7Z3 1164 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 RSAD1Q9HA92 442 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 HCN4Q9Y3Q4 1203 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 DENND4AQ7Z401 1863 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 ZDBF2Q9HCK1 2354 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 WDFY4Q6ZS81 3184 aa11.69□□□□□ -0.54
EXTL3-208ENST00000520940 C2orf16Q68DN1 1984 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 PRR33A8MZF0 331 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 INO80B-WBP1J3KQ70 363 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 TSPAN1O60635 241 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 MED24O75448 989 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 GALTP07902 379 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 SPATA31C1P0DKV0 1188 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
EXTL3-208ENST00000520940 GLRA2P23416 452 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 AXLP30530 894 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 CA8P35219 290 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 ARL2P36404 184 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 TECP42680 631 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 SLC11A1P49279 550 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
EXTL3-208ENST00000520940 MBTD1Q05BQ5 628 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 GNL2Q13823 731 aaKnown RBP11.68□□□□□ -0.54
EXTL3-208ENST00000520940 BMS1Q14692 1282 aaKnown RBP11.68□□□□□ -0.54
EXTL3-208ENST00000520940 ZNF174Q15697 407 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 TTC38Q5R3I4 469 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 ANKRD54Q6NXT1 300 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 NOTUMQ6P988 496 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 DDX53Q86TM3 631 aaKnown RBP11.68□□□□□ -0.54
EXTL3-208ENST00000520940 RNF135Q8IUD6 432 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 NOSTRINQ8IVI9 506 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 VPS52Q8N1B4 723 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 MRPL43Q8N983 215 aaKnown RBP11.68□□□□□ -0.54
EXTL3-208ENST00000520940 FAM184AQ8NB25 1140 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 BCL7CQ8WUZ0 217 aaPredicted RBP11.68□□□□□ -0.54
EXTL3-208ENST00000520940 CASP10Q92851 521 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 IGSF21Q96ID5 467 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 CPB2Q96IY4 423 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 EIF2AQ9BY44 585 aaKnown RBP11.68□□□□□ -0.54
EXTL3-208ENST00000520940 NFKBIZQ9BYH8 718 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 ZBP1Q9H171 429 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 TUFT1Q9NNX1 390 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 DNAJB4Q9UDY4 337 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 MUTYHQ9UIF7 546 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 MYH11P35749 1972 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 TRIP11Q15643 1979 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 PLXNA3P51805 1871 aa11.68□□□□□ -0.54
EXTL3-208ENST00000520940 MYO10Q9HD67 2058 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 A0A087WWV3 80 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 CLASP2O75122 1294 aaKnown RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 CTSAP10619 480 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 TRAPPC10P48553 1259 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 AFF1P51825 1210 aaKnown RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 AMHR2Q16671 573 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 HERC4Q5GLZ8 1057 aaPredicted RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 SYCE2Q6PIF2 218 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 CATSPER3Q86XQ3 398 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 ZNF280BQ86YH2 543 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 SMG8Q8ND04 991 aaKnown RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 CNNM3Q8NE01 707 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 MCPH1Q8NEM0 835 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 ERMNQ8TAM6 284 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 FAM193BQ96PV7 902 aaPredicted RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 POLR3CQ9BUI4 534 aaPredicted RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 APOL5Q9BWW9 433 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 PHF7Q9BWX1 381 aaPredicted RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 VN1R3Q9BXE9 311 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 CSRNP2Q9H175 543 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 S1PR5Q9H228 398 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 DBR1Q9UK59 544 aaKnown RBP11.67□□□□□ -0.54
EXTL3-208ENST00000520940 IPPQ9Y573 584 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 HCFC2Q9Y5Z7 792 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 PIEZO1Q92508 2521 aa11.67□□□□□ -0.54
EXTL3-208ENST00000520940 MTCL1Q9Y4B5 1905 aaKnown RBP11.66□□□□□ -0.54
EXTL3-208ENST00000520940 LRRIQ4A6NIV6 560 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 LOC730098B7Z3J9 87 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 INPPL1O15357 1258 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 B4GALT5O43286 388 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 DDHD2O94830 711 aa11.66□□□□□ -0.54
EXTL3-208ENST00000520940 CXCL14O95715 111 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms