RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ALCAMQ13740 583 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 VGLL4Q14135 290 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 CFAP58Q5T655 872 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 CDR2LQ86X02 465 aaPredicted RBP12.28□□□□□ -0.44
CLK4-206ENST00000520878 MCPH1Q8NEM0 835 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 SLC30A5Q8TAD4 765 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 SLC35G2Q8TBE7 412 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 KIFAP3Q92845 792 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 C1orf112Q9NSG2 853 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 C10orf71Q711Q0 1435 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 GOLGA6L10A6NI86 522 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 ZNF233A6NK53 670 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 PPP2R5AQ15172 486 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 PHLDB3Q6NSJ2 640 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 NRBP2Q9NSY0 501 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 STIM2Q9P246 746 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 USTQ9Y2C2 406 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
CLK4-206ENST00000520878 GRID2IPA4D2P6 1211 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 ATP8B1O43520 1251 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 GGPS1O95749 300 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 PDE6CP51160 858 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 MARSP56192 900 aaKnown RBP12.27□□□□□ -0.44
CLK4-206ENST00000520878 BMT2Q1RMZ1 405 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 C2CD6Q53TS8 623 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 TREML2Q5T2D2 321 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 KCTD16Q68DU8 428 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 ARHGEF19Q8IW93 802 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 MSANTD4Q8NCY6 345 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 ZNF653Q96CK0 615 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 CYP39A1Q9NYL5 469 aa12.27□□□□□ -0.44
CLK4-206ENST00000520878 DLEC1Q9Y238 1755 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 GOLGA6L10A0A0M3HER8 536 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 INO80B-WBP1J3KQ70 363 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 DGAT1O75907 488 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 KIF4AO95239 1232 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 FGGP02679 453 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 KRT19P08727 400 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 POTEJP0CG39 1038 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 PIK3CAP42336 1068 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
CLK4-206ENST00000520878 ZNF394Q53GI3 561 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 C10orf76Q5T2E6 689 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 KRT39Q6A163 491 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 PASD1Q8IV76 773 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 KCTD17Q8N5Z5 321 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 NLRP4Q96MN2 994 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 MPHOSPH6Q99547 160 aaKnown RBP12.27□□□□□ -0.45
CLK4-206ENST00000520878 TARS2Q9BW92 718 aaKnown RBP12.27□□□□□ -0.45
CLK4-206ENST00000520878 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.45
CLK4-206ENST00000520878 THAP2Q9H0W7 228 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 L1RE1Q9UN81 338 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 LRRIQ3A6PVS8 624 aaPredicted RBP12.27□□□□□ -0.45
CLK4-206ENST00000520878 COPB2P35606 906 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 MAPK7Q13164 816 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 TTC19Q6DKK2 380 aaPredicted RBP12.27□□□□□ -0.45
CLK4-206ENST00000520878 DHX38Q92620 1227 aaKnown RBP12.27□□□□□ -0.45
CLK4-206ENST00000520878 CLMNQ96JQ2 1002 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 AGPAT1Q99943 283 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 MSTO1Q9BUK6 570 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 ANKEF1Q9NU02 776 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 TAS2R14Q9NYV8 317 aa12.27□□□□□ -0.45
CLK4-206ENST00000520878 SMIM23A6NLE4 172 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
CLK4-206ENST00000520878 IRF6O14896 467 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 GPR162Q16538 588 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 XKR3Q5GH77 459 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 CATSPERGQ6ZRH7 1159 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 CCDC50Q8IVM0 306 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 TAS1R2Q8TE23 839 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 UBLCP1Q8WVY7 318 aaPredicted RBP12.26□□□□□ -0.45
CLK4-206ENST00000520878 PGRMC1O00264 195 aaKnown RBP12.26□□□□□ -0.45
CLK4-206ENST00000520878 ZNF862O60290 1169 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 SGPL1O95470 568 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 CD58P19256 250 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 MUTP22033 750 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 CCNI2Q6ZMN8 369 aaPredicted RBP12.26□□□□□ -0.45
CLK4-206ENST00000520878 THNSL1Q8IYQ7 743 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 LRRC71Q8N4P6 559 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 DBR1Q9UK59 544 aaKnown RBP12.26□□□□□ -0.45
CLK4-206ENST00000520878 ADAM21Q9UKJ8 722 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 MYH10P35580 1976 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 H3BQF6 201 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 BUB1BO60566 1050 aaPredicted RBP12.26□□□□□ -0.45
CLK4-206ENST00000520878 ERLIN2O94905 339 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 MYBL2P10244 700 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 STAT5BP51692 787 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 HIRAP54198 1017 aaPredicted RBP12.26□□□□□ -0.45
CLK4-206ENST00000520878 IFFO1Q0D2I5 559 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 EMC2Q15006 297 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 TRIM50Q86XT4 487 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 FMNL3Q8IVF7 1028 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 FBXL13Q8NEE6 735 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 TMEM117Q9H0C3 514 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 FAM204AQ9H8W3 233 aa12.26□□□□□ -0.45
CLK4-206ENST00000520878 ZNF214Q9UL59 606 aaPredicted RBP12.26□□□□□ -0.45
CLK4-206ENST00000520878 FZD9O00144 591 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms