RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 ARL10Q8N8L6 244 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 NECAB1Q8N987 351 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 RBBP8NLQ8NC74 664 aaPredicted RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 DQX1Q8TE96 717 aaKnown RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 FBXO41Q8TF61 875 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 NOC3LQ8WTT2 800 aaKnown RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 LENG1Q96BZ8 264 aaPredicted RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 FAM136AQ96C01 138 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 HAUS1Q96CS2 278 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 TAOK3Q9H2K8 898 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 MRPL46Q9H2W6 279 aaKnown RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 CCDC134Q9H6E4 229 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 RNPEPL1Q9HAU8 725 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 PPANQ9NQ55 473 aaKnown RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 PICK1Q9NRD5 415 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 FAM114A2Q9NRY5 505 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 PCDHA7Q9UN72 937 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 ITSN1Q15811 1721 aa9.34□□□□□ -0.92
SHPRH-208ENST00000520752 ANKRD26Q9UPS8 1709 aa9.34□□□□□ -0.92
SHPRH-208ENST00000520752 ZMYM6O95789 1325 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 NEDD4P46934 1319 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 MYPNQ86TC9 1320 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 GCOM1H8Y6P7 765 aaPredicted RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 O00370 1275 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 MGEA5O60502 916 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 ASLP04424 464 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 CHGBP05060 677 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 ALDH2P05091 517 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 MMEP08473 750 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 MSL3P1P0C860 447 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 MYZAPP0CAP1 466 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 SELPP16109 830 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 PORP16435 677 aaPredicted RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 TCP1P17987 556 aaKnown RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 HSPA9P38646 679 aaKnown RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 PBX1P40424 430 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 MSH2P43246 934 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 ALDH5A1P51649 535 aaPredicted RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 PMS2P54278 862 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 MTTPP55157 894 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 OCRLQ01968 901 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 RRS1Q15050 365 aaKnown RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 DUOXA2Q1HG44 320 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 GALNTL6Q49A17 601 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 TBC1D10BQ4KMP7 808 aaPredicted RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 PACS1Q6VY07 963 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 UNC13DQ70J99 1090 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 NANOGNBQ7Z5D8 188 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 TBC1D1Q86TI0 1168 aaPredicted RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 FAM186BQ8IYM0 893 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 DEPTORQ8TB45 409 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 DNAJC9Q8WXX5 260 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 RAPGEF5Q92565 580 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 ATP6V0A1Q93050 837 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 LRRC45Q96CN5 670 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 TMEM74Q96NL1 305 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 NACC1Q96RE7 527 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 USP28Q96RU2 1077 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 RPS6KC1Q96S38 1066 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 EPB41L1Q9H4G0 881 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 GDF3Q9NR23 364 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 CACNA2D2Q9NY47 1150 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 ADAM22Q9P0K1 906 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 DLGAP2Q9P1A6 1054 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 SAMD15Q9P1V8 674 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 HESX1Q9UBX0 185 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 ATP10BO94823 1461 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 NUP153P49790 1475 aaKnown RBP9.33□□□□□ -0.92
SHPRH-208ENST00000520752 ADGRB1O14514 1584 aa9.33□□□□□ -0.92
SHPRH-208ENST00000520752 RIMS2Q9UQ26 1411 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 TRPM2O94759 1503 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.32□□□□□ -0.92
SHPRH-208ENST00000520752 SMIM31A0A1B0GVY4 71 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 MEGF11A6BM72 1044 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 TRIM43BA6NCK2 446 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 ZNF233A6NK53 670 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 KRT86O43790 486 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 PDGFRBP09619 1106 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 CCDC159P0C7I6 412 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 NDUFA8P51970 172 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 GEMIN4P57678 1058 aaKnown RBP9.32□□□□□ -0.92
SHPRH-208ENST00000520752 TMEM62Q0P6H9 643 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 STK38Q15208 465 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 IMMTQ16891 758 aaKnown RBP9.32□□□□□ -0.92
SHPRH-208ENST00000520752 HP1BP3Q5SSJ5 553 aaPredicted RBP9.32□□□□□ -0.92
SHPRH-208ENST00000520752 RASIP1Q5U651 963 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 GRAMD4Q6IC98 578 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 HOOK3Q86VS8 718 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 RAB11FIP4Q86YS3 637 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 CROCCP3Q8IVE0 287 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 STK11IPQ8N1F8 1099 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 SCAIQ8N9R8 606 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 MIGA1Q8NAN2 632 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 NEK9Q8TD19 979 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 DIS3LQ8TF46 1054 aaKnown RBP9.32□□□□□ -0.92
SHPRH-208ENST00000520752 NACC2Q96BF6 587 aa9.32□□□□□ -0.92
SHPRH-208ENST00000520752 HNRNPABQ99729 332 aaKnown RBP9.32□□□□□ -0.92
SHPRH-208ENST00000520752 SPATA16Q9BXB7 569 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms