RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ST8SIA2Q92186 375 aa6.17□□□□□ -1.42
SKP1-207ENST00000520417 USP7Q93009 1102 aa6.17□□□□□ -1.42
SKP1-207ENST00000520417 MNTQ99583 582 aa6.17□□□□□ -1.42
SKP1-207ENST00000520417 CPPED1Q9BRF8 314 aaPredicted RBP6.17□□□□□ -1.42
SKP1-207ENST00000520417 ZNF703Q9H7S9 590 aaPredicted RBP6.17□□□□□ -1.42
SKP1-207ENST00000520417 GOLGA6L6A8MZA4 724 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 NRP1O14786 923 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 NRP2O60462 931 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 LY86O95711 162 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 PFKMP08237 780 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 GPR158Q5T848 1215 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 UNC5BQ8IZJ1 945 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 FAM193BQ96PV7 902 aaPredicted RBP6.16□□□□□ -1.42
SKP1-207ENST00000520417 MENTQ9BUN1 341 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 SLITRK6Q9H5Y7 841 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 NRDE2Q9H7Z3 1164 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 EMC7Q9NPA0 242 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 HDAC5Q9UQL6 1122 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 PPP2R3BQ9Y5P8 575 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 XDHP47989 1333 aa6.16□□□□□ -1.42
SKP1-207ENST00000520417 PRAMEF4O60810 478 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 PHC1P78364 1004 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 DUSP2Q05923 314 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 TAF7LQ5H9L4 462 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 CRB2Q5IJ48 1285 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 HDGFL2Q7Z4V5 671 aaPredicted RBP6.15□□□□□ -1.42
SKP1-207ENST00000520417 MDGA1Q8NFP4 955 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 SLC5A5Q92911 643 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 CHFRQ96EP1 664 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 SORCS3Q9UPU3 1222 aa6.15□□□□□ -1.42
SKP1-207ENST00000520417 KLRG2A4D1S0 409 aaPredicted RBP6.14□□□□□ -1.43
SKP1-207ENST00000520417 MTSS1O43312 755 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 HOXA3O43365 443 aaPredicted RBP6.14□□□□□ -1.43
SKP1-207ENST00000520417 CFBP00751 764 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 LPLP06858 475 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 RABGGTBP53611 331 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 SLC25A3Q00325 362 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 CT83Q5H943 113 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 KIAA0907Q7Z7F0 614 aaPredicted RBP6.14□□□□□ -1.43
SKP1-207ENST00000520417 GLB1L2Q8IW92 636 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 UBR7Q8N806 425 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 CPT1CQ8TCG5 803 aa6.14□□□□□ -1.43
SKP1-207ENST00000520417 LARP4BQ92615 738 aaKnown RBP6.14□□□□□ -1.43
SKP1-207ENST00000520417 FDXACB1Q9BRP7 624 aaPredicted RBP6.14□□□□□ -1.43
SKP1-207ENST00000520417 GSG1L2A8MUP6 293 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 GYS2P54840 703 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 MANFP55145 182 aaKnown RBP6.13□□□□□ -1.43
SKP1-207ENST00000520417 STRN3Q13033 797 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 TOB2Q14106 344 aaPredicted RBP6.13□□□□□ -1.43
SKP1-207ENST00000520417 RABL3Q5HYI8 236 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 APBB1IPQ7Z5R6 666 aaPredicted RBP6.13□□□□□ -1.43
SKP1-207ENST00000520417 MSL3Q8N5Y2 521 aaKnown RBP6.13□□□□□ -1.43
SKP1-207ENST00000520417 PPP1R14CQ8TAE6 165 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 SLC25A43Q8WUT9 341 aaPredicted RBP6.13□□□□□ -1.43
SKP1-207ENST00000520417 IL17RAQ96F46 866 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 EIF2B4Q9UI10 523 aaKnown RBP6.13□□□□□ -1.43
SKP1-207ENST00000520417 PRSS50Q9UI38 385 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 EDARQ9UNE0 448 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 NUMBLQ9Y6R0 609 aa6.13□□□□□ -1.43
SKP1-207ENST00000520417 WDR33Q9C0J8 1336 aaKnown RBP6.13□□□□□ -1.43
SKP1-207ENST00000520417 A0A087X0B3 334 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
SKP1-207ENST00000520417 CANXP27824 592 aaKnown RBP6.12□□□□□ -1.43
SKP1-207ENST00000520417 GPR15P49685 360 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 LGALS4P56470 323 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 FSTL1Q12841 308 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 UBE3CQ15386 1083 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 DDX46Q7L014 1031 aaKnown RBP6.12□□□□□ -1.43
SKP1-207ENST00000520417 TAS1R1Q7RTX1 841 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 NOP9Q86U38 636 aaKnown RBP6.12□□□□□ -1.43
SKP1-207ENST00000520417 FAM83AQ86UY5 434 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 XYLT1Q86Y38 959 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 SYNE4Q8N205 404 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 ZNF276Q8N554 614 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 GLB1L3Q8NCI6 653 aaPredicted RBP6.12□□□□□ -1.43
SKP1-207ENST00000520417 OR14C36Q8NHC7 312 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 SLKQ9H2G2 1235 aaPredicted RBP6.12□□□□□ -1.43
SKP1-207ENST00000520417 IKZF4Q9H2S9 585 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 SPON1Q9HCB6 807 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 EVLQ9UI08 416 aaPredicted RBP6.12□□□□□ -1.43
SKP1-207ENST00000520417 MAPRE3Q9UPY8 281 aa6.12□□□□□ -1.43
SKP1-207ENST00000520417 A0A087X1B8 175 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 ENPP3O14638 875 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 DNAJC6O75061 913 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 RECQL4O94761 1208 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 SEC24DO94855 1032 aaPredicted RBP6.11□□□□□ -1.43
SKP1-207ENST00000520417 HSP90B1P14625 803 aaKnown RBP6.11□□□□□ -1.43
SKP1-207ENST00000520417 PTGS2P35354 604 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 ID4P47928 161 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 GZMKP49863 264 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 INHBCP55103 352 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 DPTQ07507 201 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 TRIM25Q14258 630 aaKnown RBP6.11□□□□□ -1.43
SKP1-207ENST00000520417 C1QL3Q5VWW1 255 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 ZNF627Q7L945 461 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 RASSF3Q86WH2 238 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 HAS1Q92839 578 aa6.11□□□□□ -1.43
SKP1-207ENST00000520417 CDC5LQ99459 802 aaKnown RBP6.11□□□□□ -1.43
SKP1-207ENST00000520417 TTC1Q99614 292 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms