RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 PYGBP11216 843 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 KRT17Q04695 432 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 LRRC1Q9BTT6 524 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 IQANK1A0A1B0GTG1 560 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 S100A5P33763 92 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 PDIK1LQ8N165 341 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 AGR3Q8TD06 166 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 STMN3Q9NZ72 180 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 TBX22Q9Y458 520 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 FHOD1Q9Y613 1164 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 USP17L2Q6R6M4 530 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 ADAM33Q9BZ11 813 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 PKD2L2Q9NZM6 624 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 MAGI2Q86UL8 1455 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 SEMA3FQ13275 785 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 ZNF211Q13398 564 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-206ENST00000520002 SLC9A5Q14940 896 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 MARCOQ9UEW3 520 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-206ENST00000520002 GOLGA8IPA6NC78 632 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 MYL1P05976 194 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 NQO1P15559 274 aaKnown RBP9.23□□□□□ -0.93
CSMD1-206ENST00000520002 MARK3P27448 753 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 SYDE2Q5VT97 1194 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 TMED8Q6PL24 325 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-206ENST00000520002 ACAD11Q709F0 780 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 BBS5Q8N3I7 341 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 PSD3Q9NYI0 1048 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 ATP8B3O60423 1300 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 MAP1BP46821 2468 aaKnown RBP9.23□□□□□ -0.93
CSMD1-206ENST00000520002 CPA2P48052 419 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 CACNA2D1P54289 1103 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 CENPUQ71F23 418 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 ABI1Q8IZP0 508 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 CATSPER2Q96P56 530 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 ARHGEF5Q12774 1597 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 EEPD1Q7L9B9 569 aa9.23□□□□□ -0.93
CSMD1-206ENST00000520002 DCPSQ96C86 337 aaKnown RBP9.23□□□□□ -0.93
CSMD1-206ENST00000520002 IQCA1LA6NCM1 817 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 CTTNQ14247 550 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 PASD1Q8IV76 773 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 MDM1Q8TC05 714 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 HACD3Q9P035 362 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 SFMBT1Q9UHJ3 866 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 CPSF3Q9UKF6 684 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 TTC7AQ9ULT0 858 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 TSPAN9O75954 239 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 UTS2BQ765I0 119 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 SGSM3Q96HU1 749 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 UBE4BO95155 1302 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 F5H423 210 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 BRAFP15056 766 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 CDC37Q16543 378 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 UBE2SQ16763 222 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 SZRD1Q7Z422 152 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 METTL23Q86XA0 190 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 XPO6Q96QU8 1125 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 MSTO1Q9BUK6 570 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 MOV10L1Q9BXT6 1211 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 GTSE1Q9NYZ3 720 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 HSPA6P17066 643 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 PLIN5Q00G26 463 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 LRRC63Q05C16 580 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 RESP18Q5W5W9 173 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 ELMSAN1Q6PJG2 1045 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 GIPC2Q8TF65 315 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 NDST4Q9H3R1 872 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 VIRMAQ69YN4 1812 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 H0Y626 953 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 RHOBTB1O94844 696 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 SRGAP2CP0DJJ0 459 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 CATSPER1Q8NEC5 780 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 PNKPQ96T60 521 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 PUS7LQ9H0K6 701 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 EMILIN3Q9NT22 766 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 MAGEA13PA6NCF6 341 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 ARMC3Q5W041 872 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 SEC31BQ9NQW1 1179 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 SLC13A4Q9UKG4 626 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 ARPP19P56211 112 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 OTUD4Q01804 1114 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 RESTQ13127 1097 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 HORMAD1Q86X24 394 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 ALKBH8Q96BT7 664 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 WDR11Q9BZH6 1224 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 GOLGA8JA6NMD2 632 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 GOLGA8RI6L899 631 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 CASP1P29466 404 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 VHLP40337 213 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 ARHGDIAP52565 204 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 TRABDQ9H4I3 376 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 MYH7P12883 1935 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 CDC42BPAQ5VT25 1732 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 ADD2P35612 726 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 HSPA9P38646 679 aaKnown RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 CCZ1BP86790 482 aa9.22□□□□□ -0.93
CSMD1-206ENST00000520002 CCZ1P86791 482 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 EFTUD2Q15029 972 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 PPP6R3Q5H9R7 873 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 IRX2Q9BZI1 471 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-206ENST00000520002 TAF1DQ9H5J8 278 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms