RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PRPHP41219 470 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 RAB27AP51159 221 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 BCAR1P56945 870 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 MBTD1Q05BQ5 628 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 PCBP1Q15365 356 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC3-215ENST00000519474 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 RILPL1Q5EBL4 403 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 NOMO2Q5JPE7 1267 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 PTCRAQ6ISU1 281 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-215ENST00000519474 PDE12Q6L8Q7 609 aaKnown RBP10.37□□□□□ -0.75
HDAC3-215ENST00000519474 PADI6Q6TGC4 694 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 ZNF280BQ86YH2 543 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 FAM178BQ8IXR5 827 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 SLC39A11Q8N1S5 342 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 PGBD4Q96DM1 585 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 ZNF558Q96NG5 402 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 EIF2AQ9BY44 585 aaKnown RBP10.37□□□□□ -0.75
HDAC3-215ENST00000519474 CSRNP2Q9H175 543 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 POLR3FQ9H1D9 316 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-215ENST00000519474 FZD8Q9H461 694 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 TBC1D13Q9NVG8 400 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 CLEC1BQ9P126 229 aa10.37□□□□□ -0.75
HDAC3-215ENST00000519474 PUF60Q9UHX1 559 aaKnown RBP10.37□□□□□ -0.75
HDAC3-215ENST00000519474 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-215ENST00000519474 A0A1B0GUA9 196 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 ARHGEF35A5YM69 484 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 E9PMD0 336 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 H3BQV1 296 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 INO80B-WBP1J3KQ70 363 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 LAD1O00515 517 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 B4GALT5O43286 388 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 B4GALT3O60512 393 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 CXCL14O95715 111 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 ALDH2P05091 517 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 NRIP1P48552 1158 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 ALDH7A1P49419 539 aaKnown RBP10.36□□□□□ -0.75
HDAC3-215ENST00000519474 KRT17Q04695 432 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 NCBP1Q09161 790 aaKnown RBP10.36□□□□□ -0.75
HDAC3-215ENST00000519474 KCNC3Q14003 757 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
HDAC3-215ENST00000519474 DTHD1Q6ZMT9 781 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 LRRC43Q8N309 656 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 EFHBQ8N7U6 833 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 CNNM3Q8NE01 707 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 BSNDQ8WZ55 320 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 MSLNLQ96KJ4 702 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 BHMT2Q9H2M3 363 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 TLE6Q9H808 572 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 TLR9Q9NR96 1032 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 DDX19AQ9NUU7 478 aaKnown RBP10.36□□□□□ -0.75
HDAC3-215ENST00000519474 KANSL3Q9P2N6 904 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 DNAJB4Q9UDY4 337 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 IPPQ9Y573 584 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
HDAC3-215ENST00000519474 LRRIQ4A6NIV6 560 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 HIDE1A8MVS5 230 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 MBTPS2O43462 519 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 ERLIN2O94905 339 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 GLP2RO95838 553 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 ITGA4P13612 1032 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 ATP2C1P98194 919 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-215ENST00000519474 DUSP6Q16828 381 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 FAM187BQ17R55 369 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 NOTUMQ6P988 496 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 GLB1LQ6UWU2 654 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 TMEM184AQ6ZMB5 413 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 TMC7Q7Z402 723 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 KCNK18Q7Z418 384 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 TMEM173Q86WV6 379 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-215ENST00000519474 CDR2LQ86X02 465 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-215ENST00000519474 MRPL43Q8N983 215 aaKnown RBP10.35□□□□□ -0.75
HDAC3-215ENST00000519474 MCPH1Q8NEM0 835 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 VN1R2Q8NFZ6 395 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 SNX29Q8TEQ0 813 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 KHSRPQ92945 711 aaKnown RBP eCLIP10.35□□□□□ -0.75
HDAC3-215ENST00000519474 IGSF21Q96ID5 467 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 MRPL9Q9BYD2 267 aaKnown RBP10.35□□□□□ -0.75
HDAC3-215ENST00000519474 EPHX3Q9H6B9 360 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 RSAD1Q9HA92 442 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 NGRNQ9NPE2 291 aaKnown RBP10.35□□□□□ -0.75
HDAC3-215ENST00000519474 DNM3Q9UQ16 869 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 USP20Q9Y2K6 914 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 HES2Q9Y543 173 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-215ENST00000519474 PLXNA4Q9HCM2 1894 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 KIAA1671Q9BY89 1806 aa10.35□□□□□ -0.75
HDAC3-215ENST00000519474 UNC80Q8N2C7 3258 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 INPPL1O15357 1258 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 TBX10O75333 385 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 EYA4O95677 639 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 POMCP01189 267 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 EDN1P05305 212 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 SLC11A1P49279 550 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 CLUL1Q15846 466 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 HYIQ5T013 277 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 PLPP4Q5VZY2 271 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 KRT79Q5XKE5 535 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 HAUS3Q68CZ6 603 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms