RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SLC35C1Q96A29 364 aa13.53□□□□□ -0.24
SPIDR-209ENST00000519141 BORCS6Q96GS4 357 aa13.53□□□□□ -0.24
SPIDR-209ENST00000519141 TMEM134Q9H6X4 195 aa13.53□□□□□ -0.24
SPIDR-209ENST00000519141 LUC7L2Q9Y383 392 aaKnown RBP13.53□□□□□ -0.24
SPIDR-209ENST00000519141 MAPK13O15264 365 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 ASAP2O43150 1006 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 ZNF500O60304 480 aaPredicted RBP13.52□□□□□ -0.25
SPIDR-209ENST00000519141 F2P00734 622 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 GARTP22102 1010 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 KLRC1P26715 233 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 KLK7P49862 253 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 GRIK4Q16099 956 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 CDCA2Q69YH5 1023 aaPredicted RBP13.52□□□□□ -0.25
SPIDR-209ENST00000519141 SLC39A4Q6P5W5 647 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 INTS8Q75QN2 995 aaKnown RBP13.52□□□□□ -0.25
SPIDR-209ENST00000519141 RHPN2Q8IUC4 686 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 RNF149Q8NC42 400 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 POMGNT1Q8WZA1 660 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 BAG1Q99933 345 aaPredicted RBP13.52□□□□□ -0.25
SPIDR-209ENST00000519141 C2orf40Q9H1Z8 148 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 CAPN11Q9UMQ6 739 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 PTPN22Q9Y2R2 807 aa13.52□□□□□ -0.25
SPIDR-209ENST00000519141 TTC26A0AVF1 554 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 STX10O60499 249 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 DUSP11O75319 330 aaKnown RBP13.51□□□□□ -0.25
SPIDR-209ENST00000519141 PIGRP01833 764 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 TMOD1P28289 359 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 ADSSP30520 456 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 KRT9P35527 623 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 BFSP1Q12934 665 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 CCDC155Q8N6L0 562 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 TRPV1Q8NER1 839 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 NEK11Q8NG66 645 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 NAA15Q9BXJ9 866 aaKnown RBP13.51□□□□□ -0.25
SPIDR-209ENST00000519141 TTYH3Q9C0H2 523 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 FAM207AQ9NSI2 230 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-209ENST00000519141 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
SPIDR-209ENST00000519141 A0A1W2PQJ5 194 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 RRN3P2A6NIE6 340 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 MYL3P08590 195 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 SRGAP2CP0DJJ0 459 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 HOXD10P28358 340 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 KCNJ6P48051 423 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 CHMP4BP1P59074 171 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 FSCN1Q16658 493 aaKnown RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 KIAA0753Q2KHM9 967 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 MTHFD1LQ6UB35 978 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 TMEM139Q8IV31 216 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 LINC01465Q8N7H1 131 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 RDH13Q8NBN7 331 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 ZNF397Q8NF99 534 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 ZBTB10Q96DT7 871 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 NLRP4Q96MN2 994 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 MAP7D2Q96T17 732 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 LSM14BQ9BX40 385 aaKnown RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 RRAGDQ9NQL2 400 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 GOLGA8IPA6NC78 632 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 GOLGA8JA6NMD2 632 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 RNF225M0QZC1 329 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 KIAA0391O15091 583 aaKnown RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 ARHGAP6O43182 974 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 SMIM10L2AP0DMW4 78 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 SMIM10L2BP0DMW5 78 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 PHKA2P46019 1235 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 PSEN2P49810 448 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 ZBED6P86452 979 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 BEX3Q00994 111 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 MFSD10Q14728 455 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 SNRNP35Q16560 246 aaKnown RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 MAPK6Q16659 721 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 SLFN12LQ6IEE8 588 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 C17orf53Q8N3J3 647 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 OR8K1Q8NGG5 319 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 KAT2BQ92831 832 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 CRACR2AQ9BSW2 395 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 KATNAL1Q9BW62 490 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 MRPL4Q9BYD3 311 aaKnown RBP13.5□□□□□ -0.25
SPIDR-209ENST00000519141 CCDC113Q9H0I3 377 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 SRRDQ9UH36 339 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
SPIDR-209ENST00000519141 GTPBP10A4D1E9 387 aaKnown RBP13.49□□□□□ -0.25
SPIDR-209ENST00000519141 SEPT4O43236 478 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 PRKCBP05771 671 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 ADRB2P07550 413 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 GJB1P08034 283 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 C6orf222P0C671 652 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-209ENST00000519141 TRIM49P0CI25 452 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 TRIM49CP0CI26 452 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 MATR3P43243 847 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPIDR-209ENST00000519141 FMO5P49326 533 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 VAMP7P51809 220 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-209ENST00000519141 KCNMA1Q12791 1236 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 ARHGEF6Q15052 776 aa13.49□□□□□ -0.25
SPIDR-209ENST00000519141 EXOC3L4Q17RC7 722 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms