RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 ZNF365Q70YC5 407 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 LINC01599Q8WXQ3 324 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 KCNN1Q92952 543 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 GDF15Q99988 308 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 SLC39A2Q9NP94 309 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 PRMT7Q9NVM4 692 aaPredicted RBP23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 HOOK1Q9UJC3 728 aaKnown RBP23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 PHLPP2Q6ZVD8 1323 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 ACKR2O00590 384 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 RHOBTB3O94955 611 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 KCNA1Q09470 495 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 DSC3Q14574 896 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 NT5DC1Q5TFE4 455 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 CPB2Q96IY4 423 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 AGPAT5Q9NUQ2 364 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 EXOC1Q9NV70 894 aa23.09■■□□□ 1.29
TOP1MT-206ENST00000518951 GCNT3O95395 438 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 PFKMP08237 780 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 ARF4P18085 180 aaPredicted RBP23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 KCNB1Q14721 858 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 CDR2LQ86X02 465 aaPredicted RBP23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 KIAA0895Q8NCT3 520 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 APBB2Q92870 758 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 SMARCE1Q969G3 411 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 NUP62CLQ9H1M0 184 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 IKZF4Q9H2S9 585 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 TBX20Q9UMR3 447 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 PTPRSQ13332 1948 aa23.08■■□□□ 1.29
TOP1MT-206ENST00000518951 H0YCG3 227 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 ERLIN2O94905 339 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 PRPF6O94906 941 aaKnown RBP23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 SMC2O95347 1197 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 FGBP02675 491 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 NFKBIBQ15653 356 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 EPM2AIP1Q7L775 607 aaPredicted RBP23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 OTOP2Q7RTS6 562 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 SLC17A8Q8NDX2 589 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 PRIMPOLQ96LW4 560 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 GSDMAQ96QA5 445 aa23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 PIN4Q9Y237 131 aaKnown RBP23.07■■□□□ 1.28
TOP1MT-206ENST00000518951 HOXD13P35453 343 aa23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 PSMD2Q13200 908 aa23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 PRPF4BQ13523 1007 aaKnown RBP23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 PCBP1Q15365 356 aaKnown RBP eCLIP23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 ISM2Q6H9L7 571 aa23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 ADAM2Q99965 735 aa23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 TARS2Q9BW92 718 aaKnown RBP23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 MAN1B1Q9UKM7 699 aa23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 GDAQ9Y2T3 454 aa23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 CNTNAP2Q9UHC6 1331 aa23.06■■□□□ 1.28
TOP1MT-206ENST00000518951 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 ENPP3O14638 875 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 STRN3Q13033 797 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 IKBKEQ14164 716 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 C9orf50Q5SZB4 431 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 PSRC1Q6PGN9 363 aaPredicted RBP23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 MAP4K3Q8IVH8 894 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 SCFD1Q8WVM8 642 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 ACO2Q99798 780 aaKnown RBP23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 TMEM63CQ9P1W3 806 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 KIAA1468Q9P260 1216 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 PCDHB13Q9Y5F0 798 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 A0A1B0GUA9 196 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 UBXN11Q5T124 520 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 L1TD1Q5T7N2 865 aaKnown RBP23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 EEF1DP3Q658K8 133 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.05■■□□□ 1.282e-7■■□□□ 13.6
TOP1MT-206ENST00000518951 ZNF507Q8TCN5 953 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 CCDC47Q96A33 483 aaKnown RBP23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 ZBTB45Q96K62 511 aaPredicted RBP23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 FTHL17Q9BXU8 183 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 TSPYL2Q9H2G4 693 aaPredicted RBP23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 CHST12Q9NRB3 414 aa23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 CXXC1Q9P0U4 656 aaPredicted RBP23.05■■□□□ 1.28
TOP1MT-206ENST00000518951 TTC3P53804 2025 aa23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 ZSCAN20P17040 1043 aaPredicted RBP23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 BMP6P22004 513 aa23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 SCP2P22307 547 aa23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 AXLP30530 894 aa23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 SMYD4Q8IYR2 804 aaPredicted RBP23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 HERVK_113Q902F9 699 aa23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 HVCN1Q96D96 273 aa23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 MRPL4Q9BYD3 311 aaKnown RBP23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 PDZD7Q9H5P4 517 aa23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 RGS18Q9NS28 235 aa23.04■■□□□ 1.28
TOP1MT-206ENST00000518951 RANBP2P49792 3224 aaKnown RBP23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 ABHD14A-ACY1A0A1B0GW23 586 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 TISP43B9A030 160 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 ANKRD63C9JTQ0 380 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 BIN1O00499 593 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 EIF3DO15371 548 aaKnown RBP eCLIP23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 ACTN1P12814 892 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 PTMSP20962 102 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 ALCAMQ13740 583 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 SHHQ15465 462 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 KLHL40Q2TBA0 621 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 ATF7IP2Q5U623 682 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 SLC39A4Q6P5W5 647 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 ACCSQ96QU6 501 aa23.03■■□□□ 1.28
TOP1MT-206ENST00000518951 EIF2AQ9BY44 585 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms