RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 UBE3CQ15386 1083 aa7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 ELAVL1Q15717 326 aaKnown RBP7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 FSCN1Q16658 493 aaKnown RBP7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 UGT8Q16880 541 aa7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 IGFL4Q6B9Z1 124 aa7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 ZNF662Q6ZS27 426 aa7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 OR14C36Q8NHC7 312 aa7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 LMBR1Q8WVP7 490 aa7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 DPP7Q9UHL4 492 aa7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 KCNG1Q9UIX4 513 aa7.29□□□□□ -1.24
SCARNA1-201ENST00000517138 GOLGA8AA7E2F4 631 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 GPR39O43194 453 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 MTSS1O43312 755 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 ENPP1P22413 925 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 ACRV1P26436 265 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 CANXP27824 592 aaKnown RBP7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 CCT2P78371 535 aaKnown RBP7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 SPIDRQ14159 915 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 FKBP15Q5T1M5 1219 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 IQSEC1Q6DN90 963 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 LMBR1LQ6UX01 489 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 TAS1R1Q7RTX1 841 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 C1orf210Q8IVY1 113 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 ZNF512Q96ME7 567 aaPredicted RBP7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 MPHOSPH9Q99550 1183 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 QRSL1Q9H0R6 528 aaKnown RBP7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 WNT8AQ9H1J5 351 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 VPS11Q9H270 941 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 C14orf119Q9NWQ9 140 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 SBNO2Q9Y2G9 1366 aa7.28□□□□□ -1.24
SCARNA1-201ENST00000517138 C6P13671 934 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 XPAP23025 273 aaPredicted RBP7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 PTTG1IPP53801 180 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 NPEPPSP55786 919 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 CDK17Q00537 523 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 HHEXQ03014 270 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 RRP1BQ14684 758 aaKnown RBP7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 C1QL3Q5VWW1 255 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 CRIP3Q6Q6R5 217 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 LILRA3Q8N6C8 439 aaPredicted RBP7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 MB21D1Q8N884 522 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 WDR66Q8TBY9 1149 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 TSPEARQ8WU66 669 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 ZNF503Q96F45 646 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 CADPSQ9ULU8 1353 aa7.27□□□□□ -1.25
SCARNA1-201ENST00000517138 NRP2O60462 931 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 RABGGTBP53611 331 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 FOXE3Q13461 319 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 CCDC178Q5BJE1 867 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 GLB1L2Q8IW92 636 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 ARL8AQ96BM9 186 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 MIEF2Q96C03 454 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 PGBD4Q96DM1 585 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 SCAND2PQ9GZW5 306 aaPredicted RBP7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 CEP72Q9P209 647 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 GIT1Q9Y2X7 761 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 PRKAB1Q9Y478 270 aa7.26□□□□□ -1.25
SCARNA1-201ENST00000517138 PRAMEF4O60810 478 aa7.25□□□□□ -1.25
SCARNA1-201ENST00000517138 GPR3P46089 330 aa7.25□□□□□ -1.25
SCARNA1-201ENST00000517138 NRG3P56975 720 aa7.25□□□□□ -1.25
SCARNA1-201ENST00000517138 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.25
SCARNA1-201ENST00000517138 OR5M3Q8NGP4 307 aa7.25□□□□□ -1.25
SCARNA1-201ENST00000517138 ATL2Q8NHH9 583 aa7.25□□□□□ -1.25
SCARNA1-201ENST00000517138 ACAP3Q96P50 834 aa7.25□□□□□ -1.25
SCARNA1-201ENST00000517138 TRIM8Q9BZR9 551 aa7.25□□□□□ -1.25
SCARNA1-201ENST00000517138 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 HOXA3O43365 443 aaPredicted RBP7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 LTA4HP09960 611 aaKnown RBP7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 TACR2P21452 398 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 CTSSP25774 331 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 SRSF2Q01130 221 aaKnown RBP7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 CRHR2Q13324 411 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 TOR2AQ5JU69 321 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 MIIPQ5JXC2 388 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 KCNK18Q7Z418 384 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 RSAD2Q8WXG1 361 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 AHCYL2Q96HN2 611 aaKnown RBP7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 ORAI2Q96SN7 254 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 LSM14BQ9BX40 385 aaKnown RBP7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 TMPRSS5Q9H3S3 457 aa7.24□□□□□ -1.25
SCARNA1-201ENST00000517138 ZMYM3Q14202 1370 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 PHLDB1Q86UU1 1377 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 KLRG2A4D1S0 409 aaPredicted RBP7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 NPIPB8E9PQR5 432 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 WNT10BO00744 389 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 FSHBP01225 129 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 HK1P19367 917 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 ERVK-21P61565 698 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 DUSP2Q05923 314 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 SPATS2Q86XZ4 545 aaKnown RBP7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 XYLT1Q86Y38 959 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 TMPRSS6Q8IU80 811 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 THEMISQ8N1K5 641 aaPredicted RBP7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 ANKRD35Q8N283 1001 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 CACTINQ8WUQ7 758 aaKnown RBP7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 ATXN2LQ8WWM7 1075 aaKnown RBP7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 PLEKHG4BQ96PX9 1271 aa7.23□□□□□ -1.25
SCARNA1-201ENST00000517138 CPEB1Q9BZB8 566 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms