RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 GUCY2CP25092 1073 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 UBA7P41226 1012 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 AAK1Q2M2I8 961 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 SPOUT1Q5T280 376 aaKnown RBP14.13□□□□□ -0.15
CLCN3-210ENST00000515420 RINT1Q6NUQ1 792 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 C1orf186Q6ZWK4 172 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 MAEAQ7L5Y9 396 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 KCNK18Q7Z418 384 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 CABP7Q86V35 215 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 SYT2Q8N9I0 419 aaPredicted RBP14.13□□□□□ -0.15
CLCN3-210ENST00000515420 KLHL23Q8NBE8 558 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 DEPTORQ8TB45 409 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 SPPL3Q8TCT6 385 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 HELQQ8TDG4 1101 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 BSNDQ8WZ55 320 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 CALML4Q96GE6 196 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 PNMA5Q96PV4 448 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 CCDC113Q9H0I3 377 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 KANSL3Q9P2N6 904 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 KCNG1Q9UIX4 513 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 LZTS1Q9Y250 596 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 MYO7AQ13402 2215 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 INPPL1O15357 1258 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 NCK2O43639 380 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 MRPS5P82675 430 aaKnown RBP14.12□□□□□ -0.15
CLCN3-210ENST00000515420 PLCB3Q01970 1234 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 COL19A1Q14993 1142 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 SKIV2LQ15477 1246 aaKnown RBP14.12□□□□□ -0.15
CLCN3-210ENST00000515420 MAPK6Q16659 721 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 NOMO2Q5JPE7 1267 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 PDE12Q6L8Q7 609 aaKnown RBP14.12□□□□□ -0.15
CLCN3-210ENST00000515420 SLC27A1Q6PCB7 646 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 LRRC55Q6ZSA7 311 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 HACE1Q8IYU2 909 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 HLA-CQ95604 372 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 PPP2R3CQ969Q6 453 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 ZNF558Q96NG5 402 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 CCSER1Q9C0I3 900 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 RSAD1Q9HA92 442 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 ALG13Q9NP73 1137 aaKnown RBP14.12□□□□□ -0.15
CLCN3-210ENST00000515420 SRPRBQ9Y5M8 271 aaKnown RBP14.12□□□□□ -0.15
CLCN3-210ENST00000515420 CLIC4Q9Y696 253 aa14.12□□□□□ -0.15
CLCN3-210ENST00000515420 ACKR2O00590 384 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 N4BP3O15049 544 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 HIP1RO75146 1068 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 OFD1O75665 1012 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 FGF18O76093 207 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 NASPP49321 788 aaPredicted RBP14.11□□□□□ -0.15
CLCN3-210ENST00000515420 SLC12A3P55017 1021 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 MAPK7Q13164 816 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 DMP1Q13316 513 aaPredicted RBP14.11□□□□□ -0.15
CLCN3-210ENST00000515420 CAMK1Q14012 370 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 SLC39A14Q15043 492 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 TJAP1Q5JTD0 557 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 KCNT2Q6UVM3 1135 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 AGMOQ6ZNB7 445 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 THNSL1Q8IYQ7 743 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 DAW1Q8N136 415 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 SMG8Q8ND04 991 aaKnown RBP14.11□□□□□ -0.15
CLCN3-210ENST00000515420 URGCPQ8TCY9 931 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 LPPQ93052 612 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 CPB2Q96IY4 423 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 RUSC1Q9BVN2 902 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 TRIM6Q9C030 488 aaPredicted RBP14.11□□□□□ -0.15
CLCN3-210ENST00000515420 PRDM6Q9NQX0 595 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 FBXO2Q9UK22 296 aaPredicted RBP14.11□□□□□ -0.15
CLCN3-210ENST00000515420 RBM19Q9Y4C8 960 aaKnown RBP14.11□□□□□ -0.15
CLCN3-210ENST00000515420 IPPQ9Y573 584 aa14.11□□□□□ -0.15
CLCN3-210ENST00000515420 TDRD15B5MCY1 1934 aaKnown RBP14.11□□□□□ -0.15
CLCN3-210ENST00000515420 FSD2A1L4K1 749 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 B4GALT5O43286 388 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 ABCB7O75027 752 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 PRKCBP05771 671 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 PLA2G4BP0C869 781 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 ITGA4P13612 1032 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 ALDH7A1P49419 539 aaKnown RBP14.1□□□□□ -0.15
CLCN3-210ENST00000515420 PRPF4BQ13523 1007 aaKnown RBP14.1□□□□□ -0.15
CLCN3-210ENST00000515420 ZRSR1Q15695 479 aaKnown RBP14.1□□□□□ -0.15
CLCN3-210ENST00000515420 POF1BQ8WVV4 589 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 MRPS27Q92552 414 aaKnown RBP14.1□□□□□ -0.15
CLCN3-210ENST00000515420 SYMPKQ92797 1274 aaKnown RBP14.1□□□□□ -0.15
CLCN3-210ENST00000515420 ASB2Q96Q27 587 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 USP28Q96RU2 1077 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 NTPCRQ9BSD7 190 aaKnown RBP14.1□□□□□ -0.15
CLCN3-210ENST00000515420 EIF2AQ9BY44 585 aaKnown RBP14.1□□□□□ -0.15
CLCN3-210ENST00000515420 TMEM134Q9H6X4 195 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 TLR9Q9NR96 1032 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 TBC1D13Q9NVG8 400 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 SPG21Q9NZD8 308 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 ARHGAP28Q9P2N2 729 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 HCSTQ9UBK5 93 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 PUF60Q9UHX1 559 aaKnown RBP14.1□□□□□ -0.15
CLCN3-210ENST00000515420 ODF2LQ9ULJ1 636 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 GIT1Q9Y2X7 761 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 XIRP2A4UGR9 3374 aa14.1□□□□□ -0.15
CLCN3-210ENST00000515420 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.09□□□□□ -0.15
CLCN3-210ENST00000515420 MEIS3P2A8K0S8 358 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 PLCG1P19174 1290 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 SCP2P22307 547 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms