RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 AMHR2Q16671 573 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 ISM2Q6H9L7 571 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 SASS6Q6UVJ0 657 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 FAM228AQ86W67 206 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 ACCSQ96QU6 501 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 CNTNAP2Q9UHC6 1331 aa23.06■■□□□ 1.28
LSM6-207ENST00000515311 GPR182O15218 404 aa23.05■■□□□ 1.28
LSM6-207ENST00000515311 CSDE1O75534 798 aaKnown RBP23.05■■□□□ 1.28
LSM6-207ENST00000515311 GHRP10912 638 aa23.05■■□□□ 1.28
LSM6-207ENST00000515311 NLRP12P59046 1061 aa23.05■■□□□ 1.28
LSM6-207ENST00000515311 PAK2Q13177 524 aa23.05■■□□□ 1.28
LSM6-207ENST00000515311 CATSPER4Q7RTX7 472 aa23.05■■□□□ 1.28
LSM6-207ENST00000515311 SMYD4Q8IYR2 804 aaPredicted RBP23.05■■□□□ 1.28
LSM6-207ENST00000515311 MLKLQ8NB16 471 aa23.05■■□□□ 1.28
LSM6-207ENST00000515311 MRPL4Q9BYD3 311 aaKnown RBP23.05■■□□□ 1.28
LSM6-207ENST00000515311 TMEM206Q9H813 350 aa23.05■■□□□ 1.28
LSM6-207ENST00000515311 EXOC7Q9UPT5 735 aa23.05■■□□□ 1.28
LSM6-207ENST00000515311 TSPAN1O60635 241 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 NBNO60934 754 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 PRPF6O94906 941 aaKnown RBP23.04■■□□□ 1.28
LSM6-207ENST00000515311 PIGRP01833 764 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 CXCL10P02778 98 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 HOXD13P35453 343 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 CCL23P55773 120 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 NCBP1Q09161 790 aaKnown RBP23.04■■□□□ 1.28
LSM6-207ENST00000515311 PRPF4BQ13523 1007 aaKnown RBP23.04■■□□□ 1.28
LSM6-207ENST00000515311 STIM1Q13586 685 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 GPNMBQ14956 572 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 MFSD5Q6N075 450 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 ZPBP2Q6X784 338 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 ADSSL1Q8N142 457 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 AGO3Q9H9G7 860 aaKnown RBP23.04■■□□□ 1.28
LSM6-207ENST00000515311 ERVK-5Q9HDB9 667 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 AGPAT5Q9NUQ2 364 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 PADI3Q9ULW8 664 aa23.04■■□□□ 1.28
LSM6-207ENST00000515311 ZMYM2Q9UBW7 1377 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 SYCE3A1L190 88 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 ITGB8P26012 769 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 AXLP30530 894 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 CD52P31358 61 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 PRCPP42785 496 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 KCNA1Q09470 495 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 STX1AQ16623 288 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 KNOP1Q1ED39 458 aaKnown RBP23.03■■□□□ 1.28
LSM6-207ENST00000515311 TMEM199Q8N511 208 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 DPF3Q92784 378 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 SCLYQ96I15 445 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 OSBPL7Q9BZF2 842 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 ST3GAL5Q9UNP4 418 aa23.03■■□□□ 1.28
LSM6-207ENST00000515311 PPP1R3GB7ZBB8 358 aa23.02■■□□□ 1.28
LSM6-207ENST00000515311 HNRNPDLO14979 420 aaKnown RBP23.02■■□□□ 1.28
LSM6-207ENST00000515311 EDN1P05305 212 aa23.02■■□□□ 1.28
LSM6-207ENST00000515311 FGFR4P22455 802 aa23.02■■□□□ 1.28
LSM6-207ENST00000515311 DPCR1Q3MIW9 517 aa23.02■■□□□ 1.28
LSM6-207ENST00000515311 PLEKHG4Q58EX7 1191 aa23.02■■□□□ 1.28
LSM6-207ENST00000515311 DHTKD1Q96HY7 919 aaPredicted RBP23.02■■□□□ 1.28
LSM6-207ENST00000515311 IFIH1Q9BYX4 1025 aaKnown RBP23.02■■□□□ 1.28
LSM6-207ENST00000515311 ANO10Q9NW15 660 aa23.02■■□□□ 1.28
LSM6-207ENST00000515311 DACH1Q9UI36 760 aa23.02■■□□□ 1.28
LSM6-207ENST00000515311 MAPK8IP1Q9UQF2 711 aa23.02■■□□□ 1.28
LSM6-207ENST00000515311 PSMA7O14818 248 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 B4GALT5O43286 388 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 CCDC192P0DO97 292 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 CD44P16070 742 aaKnown RBP23.01■■□□□ 1.27
LSM6-207ENST00000515311 ARF4P18085 180 aaPredicted RBP23.01■■□□□ 1.27
LSM6-207ENST00000515311 HOXA11P31270 313 aaPredicted RBP23.01■■□□□ 1.27
LSM6-207ENST00000515311 SNRPFP62306 86 aaKnown RBP23.01■■□□□ 1.27
LSM6-207ENST00000515311 TYRO3Q06418 890 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 NELFCDQ8IXH7 590 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 SYCP3Q8IZU3 236 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 APBB2Q92870 758 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 CCDC51Q96ER9 411 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 BICD1Q96G01 975 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 ACO2Q99798 780 aaKnown RBP23.01■■□□□ 1.27
LSM6-207ENST00000515311 GBP3Q9H0R5 595 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 KCTD10Q9H3F6 313 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 CHST12Q9NRB3 414 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 NR2E3Q9Y5X4 410 aa23.01■■□□□ 1.27
LSM6-207ENST00000515311 A0A1B0GUA9 196 aa23■■□□□ 1.27
LSM6-207ENST00000515311 TTLL13PA6NNM8 815 aa23■■□□□ 1.27
LSM6-207ENST00000515311 PFKMP08237 780 aa23■■□□□ 1.27
LSM6-207ENST00000515311 LIG4P49917 911 aa23■■□□□ 1.27
LSM6-207ENST00000515311 NFX1Q12986 1120 aaKnown RBP23■■□□□ 1.27
LSM6-207ENST00000515311 CT47A1Q5JQC4 288 aaPredicted RBP23■■□□□ 1.27
LSM6-207ENST00000515311 ATF7IP2Q5U623 682 aa23■■□□□ 1.27
LSM6-207ENST00000515311 NOTUMQ6P988 496 aa23■■□□□ 1.27
LSM6-207ENST00000515311 GOLGA5Q8TBA6 731 aa23■■□□□ 1.27
LSM6-207ENST00000515311 SEPT8Q92599 483 aa23■■□□□ 1.27
LSM6-207ENST00000515311 FUCA2Q9BTY2 467 aa23■■□□□ 1.27
LSM6-207ENST00000515311 TARS2Q9BW92 718 aaKnown RBP23■■□□□ 1.27
LSM6-207ENST00000515311 CGNQ9P2M7 1197 aaKnown RBP23■■□□□ 1.27
LSM6-207ENST00000515311 TNFSF13BQ9Y275 285 aa23■■□□□ 1.27
LSM6-207ENST00000515311 TET1Q8NFU7 2136 aa23■■□□□ 1.27
LSM6-207ENST00000515311 PDXKO00764 312 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 N4BP3O15049 544 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 TGFB1I1O43294 461 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 TOM1L1O75674 476 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 RGS19P49795 217 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 CENPPQ6IPU0 288 aa22.99■■□□□ 1.27
LSM6-207ENST00000515311 FOXR2Q6PJQ5 311 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms