RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	FSCN1	Q16658	493 aa	Known RBP	5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	METTL24	Q5JXM2	366 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	HTR3D	Q70Z44	454 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	CLRN3	Q8NCR9	226 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	IL17D	Q8TAD2	202 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	EXTL1	Q92935	676 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	PDCD2L	Q9BRP1	358 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	ANO3	Q9BYT9	981 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	ENKD1	Q9H0I2	346 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	SRRD	Q9UH36	339 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	CDY2A	Q9Y6F7	541 aa		5.87	□□□□□ -1.47
MATR3-223	ENST00000514402	LCHN	A4D1U4	455 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	AMH	P03971	560 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	LTA4H	P09960	611 aa	Known RBP	5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	MAN2A2	P49641	1150 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	PTH1R	Q03431	593 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	CRHR2	Q13324	411 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	C19orf54	Q5BKX5	351 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	PITRM1	Q5JRX3	1037 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	EGFLAM	Q63HQ2	1017 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	CCDC62	Q6P9F0	684 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	STRA8	Q7Z7C7	330 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	LYSMD2	Q8IV50	215 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	GSPT2	Q8IYD1	628 aa	Known RBP	5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	MDGA1	Q8NFP4	955 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	RAX2	Q96IS3	184 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	ZNF512	Q96ME7	567 aa	Predicted RBP	5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	MS4A5	Q9H3V2	200 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	PARPBP	Q9NWS1	579 aa		5.86	□□□□□ -1.47
MATR3-223	ENST00000514402	GYPE	P15421	78 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	ENPP1	P22413	925 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	ACVRL1	P37023	503 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	MGAT5	Q09328	741 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	UGT8	Q16880	541 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	NAIF1	Q69YI7	327 aa	Predicted RBP	5.85	□□□□□ -1.47
MATR3-223	ENST00000514402		Q8N1X5	172 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	CACTIN	Q8WUQ7	758 aa	Known RBP	5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	KCTD10	Q9H3F6	313 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	ING3	Q9NXR8	418 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	NCDN	Q9UBB6	729 aa		5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	EVL	Q9UI08	416 aa	Predicted RBP	5.85	□□□□□ -1.47
MATR3-223	ENST00000514402	GOLGA6L6	A8MZA4	724 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	PLSCR1	O15162	318 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	EYA4	O95677	639 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	CLEC2L	P0C7M8	214 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	GNAT2	P19087	354 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	ID4	P47928	161 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	MRPS9	P82933	396 aa	Known RBP	5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	DUSP2	Q05923	314 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	CNGB1	Q14028	1251 aa	Predicted RBP	5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	TRIM25	Q14258	630 aa	Known RBP	5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	RRP1B	Q14684	758 aa	Known RBP	5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	STAT4	Q14765	748 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	PDCD1	Q15116	288 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	UBR7	Q8N806	425 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	ST8SIA2	Q92186	375 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	PLEKHG4B	Q96PX9	1271 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	ORAI2	Q96SN7	254 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	CLCA2	Q9UQC9	943 aa		5.84	□□□□□ -1.47
MATR3-223	ENST00000514402	HOXA3	O43365	443 aa	Predicted RBP	5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	MTHFD2	P13995	350 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	RABGGTB	P53611	331 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	LGALS4	P56470	323 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	CT83	Q5H943	113 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	RNF219	Q5W0B1	726 aa	Predicted RBP	5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	IQSEC1	Q6DN90	963 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	DOK3	Q7L591	496 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	SPATS2	Q86XZ4	545 aa	Known RBP	5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	IL17RA	Q96F46	866 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	ZNF341	Q9BYN7	854 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	CSRNP2	Q9H175	543 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	CEP72	Q9P209	647 aa		5.83	□□□□□ -1.48
MATR3-223	ENST00000514402	GPR39	O43194	453 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	AKAP8	O43823	692 aa	Known RBP	5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	PHF2	O75151	1096 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	GAST	P01350	101 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	CNGA1	P29973	690 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	GZMK	P49863	264 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	MRPL49	Q13405	166 aa	Known RBP	5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	TUBA3C	Q13748	450 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	UBE3C	Q15386	1083 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	ANO4	Q32M45	955 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	LSM12	Q3MHD2	195 aa	Known RBP	5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	TUBA3E	Q6PEY2	450 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402		Q6ZRM9	215 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	FAM83A	Q86UY5	434 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	SLC16A11	Q8NCK7	471 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	OR5M3	Q8NGP4	307 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	SNX33	Q8WV41	574 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	LMBR1	Q8WVP7	490 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	GPR87	Q9BY21	358 aa		5.82	□□□□□ -1.48
MATR3-223	ENST00000514402	XDH	P47989	1333 aa		5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms