RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 RRN3P2A6NIE6 340 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 MEIS3P2A8K0S8 358 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 B4GALT3O60512 393 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 CSDE1O75534 798 aaKnown RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 RPP40O75818 363 aaKnown RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 URODP06132 367 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 GALTP07902 379 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 FGFR4P22455 802 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 KLRC1P26715 233 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 CNR2P34972 360 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 GRM2Q14416 872 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 PLA2G2CQ5R387 149 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 GPATCH4Q5T3I0 446 aaKnown RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 TSHZ3Q63HK5 1081 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 RSPO2Q6UXX9 243 aaPredicted RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 MTSS1LQ765P7 747 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 HOMER1Q86YM7 354 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 PLEKHM2Q8IWE5 1019 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ZNF687Q8N1G0 1237 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ITFG1Q8TB96 612 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 SEPT1Q8WYJ6 367 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 FAM3CQ92520 227 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ARHGAP45Q92619 1136 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 B3GALT6Q96L58 329 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ARID3AQ99856 593 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 MRPL9Q9BYD2 267 aaKnown RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 SMARCAD1Q9H4L7 1026 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 CCDC86Q9H6F5 360 aaKnown RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 NRDE2Q9H7Z3 1164 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 PCDHA2Q9Y5H9 948 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 KDM3AQ9Y4C1 1321 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 GOLGA4Q13439 2230 aaKnown RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 NBPF19A0A087WUL8 3843 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 SMIM35A0A1B0GVV1 85 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 TRIM6-TRIM34B2RNG4 842 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 K7ESF4 209 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 GAS2O43903 313 aaKnown RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 CAPNS1P04632 268 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 RPLP2P05387 115 aaKnown RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 SNHG28P0DPA3 235 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 SLC11A1P49279 550 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 CEP85Q6P2H3 762 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 ELMSAN1Q6PJG2 1045 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 MTHFD1LQ6UB35 978 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 ZNF280BQ86YH2 543 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 ITPRIPQ8IWB1 547 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 KIAA0319LQ8IZA0 1049 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 METTL13Q8N6R0 699 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 KIF1BPQ96EK5 621 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 AMNQ9BXJ7 453 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 PLA2G2FQ9BZM2 168 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 AZI2Q9H6S1 392 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 BRD9Q9H8M2 597 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 JMJD4Q9H9V9 463 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 VPS45Q9NRW7 570 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 TBC1D13Q9NVG8 400 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 DPP7Q9UHL4 492 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 BAZ2BQ9UIF8 2168 aaKnown RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 PATE3B3GLJ2 98 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 RNF113AO15541 343 aaKnown RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 TGM5O43548 720 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 PPP1R11O60927 126 aaPredicted RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 EPN2O95208 641 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 CHRM1P11229 460 aaPredicted RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 RPL17P18621 184 aaKnown RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 CCNE1P24864 410 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 RAP1GAPP47736 663 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 NOVP48745 357 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 DSC3Q14574 896 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 ODR4Q5SWX8 454 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 TAS1R1Q7RTX1 841 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 CACNA2D4Q7Z3S7 1137 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 ABCA7Q8IZY2 2146 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 ZNF710Q8N1W2 664 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 ZNF843Q8N446 348 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 KBTBD3Q8NAB2 608 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 RPS6KC1Q96S38 1066 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 PRKD2Q9BZL6 878 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 CLMPQ9H6B4 373 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 TMEM9BQ9NQ34 198 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 JADE2Q9NQC1 790 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 HCFC1R1Q9NWW0 138 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 PRG3Q9Y2Y8 225 aaPredicted RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 PIAS3Q9Y6X2 628 aa3.73□□□□□ -1.81
CHD1-211ENST00000514344 UTP20O75691 2785 aaKnown RBP3.73□□□□□ -1.81
CHD1-211ENST00000514344 A0A0U1RQF3 1178 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 GCOM1H8Y6P7 765 aaPredicted RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 CDX4O14627 284 aaPredicted RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 IPO8O15397 1037 aaKnown RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 CCL16O15467 120 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 LILRB3O75022 631 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 CAVIN2O95810 425 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 POLR2MP0CAP2 368 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 CHRNB1P11230 501 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 MAPK8P45983 427 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 AFF1P51825 1210 aaKnown RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 HSP90AB4PQ58FF6 505 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 NME8Q8N427 588 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 SPEM1Q8N4L4 309 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 PNPLA1Q8N8W4 532 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms