RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CYLDQ9NQC7 956 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 LRWD1Q9UFC0 647 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 PRR12Q9ULL5 1215 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 HYOU1Q9Y4L1 999 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 LRRC37A2A6NM11 1700 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 LCTP09848 1927 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 EBAG9O00559 213 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 ZBTB5O15062 677 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 DDX3YO15523 660 aaKnown RBP8.06□□□□□ -1.12
CLIP1-205ENST00000514271 TRPA1O75762 1119 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 CNMDO75829 334 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 RARAP10276 462 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 XBP1P17861 261 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 HOXD13P35453 343 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 BIRC3Q13489 604 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 GRB14Q14449 540 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 SIX1Q15475 284 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-205ENST00000514271 SLC4A8Q2Y0W8 1093 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 CCDC40Q4G0X9 1142 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 HSP90AA4PQ58FG1 418 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 PARP9Q8IXQ6 854 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 TRIM22Q8IYM9 498 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 DNERQ8NFT8 737 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 MBOAT7Q96N66 472 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 NAP1L4Q99733 375 aaKnown RBP8.06□□□□□ -1.12
CLIP1-205ENST00000514271 FAM129AQ9BZQ8 928 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 RBPJLQ9UBG7 517 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 SRRDQ9UH36 339 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 AGAP1Q9UPQ3 857 aa8.06□□□□□ -1.12
CLIP1-205ENST00000514271 KLRF2D3W0D1 207 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 OPA1O60313 960 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 NR1D1P20393 614 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 ANXA13P27216 316 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 KIF11P52732 1056 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 AKAP17AQ02040 695 aaKnown RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 TTC38Q5R3I4 469 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 PPFIBP1Q86W92 1011 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 RAB11FIP4Q86YS3 637 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 ENDOVQ8N8Q3 282 aaKnown RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 RASSF8Q8NHQ8 419 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 TUBGCP2Q9BSJ2 902 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 SLC39A2Q9NP94 309 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 RMND1Q9NWS8 449 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 FZD1Q9UP38 647 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 LRRC42Q9Y546 428 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 RPTORQ8N122 1335 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 SYNGAP1Q96PV0 1343 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 STXBP3O00186 592 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 TNPO2O14787 897 aaKnown RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 MSCO60682 206 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 LINGO3P0C6S8 592 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 FCER1AP12319 257 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 TCF3P15923 654 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 CCT6AP40227 531 aaKnown RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 PTGIRP43119 386 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 UBXN2AP68543 259 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 CCDC15Q0P6D6 951 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 STK4Q13043 487 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 IKQ13123 557 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 KCTD2Q14681 263 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 NFIL3Q16649 462 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 CYP1B1Q16678 543 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 MORN1Q5T089 497 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 MIS18BP1Q6P0N0 1132 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 FBXO11Q86XK2 927 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 ZDHHC14Q8IZN3 488 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 SH3TC2Q8TF17 1288 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 RAPGEF5Q92565 580 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 SLCO2A1Q92959 643 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 P2RX5Q93086 422 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 ASB14A6NK59 587 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 ZSWIM8A7E2V4 1837 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 F8VZ95 297 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 SLC26A4O43511 780 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 KRT86O43790 486 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 TCEA3O75764 348 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 FOSP01100 380 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 CREB5Q02930 508 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 MGAT5Q09328 741 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 MAP2K5Q13163 448 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 PUS10Q3MIT2 529 aaKnown RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 DUPD1Q68J44 220 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 USP6NLQ92738 828 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 SEC16BQ96JE7 1060 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 ANKRD27Q96NW4 1050 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 MOV10L1Q9BXT6 1211 aaKnown RBP8.05□□□□□ -1.12
CLIP1-205ENST00000514271 SMARCAL1Q9NZC9 954 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 GRHL1Q9NZI5 618 aa8.05□□□□□ -1.12
CLIP1-205ENST00000514271 PIK3CDO00329 1044 aa8.04□□□□□ -1.12
CLIP1-205ENST00000514271 MAP3K13O43283 966 aa8.04□□□□□ -1.12
CLIP1-205ENST00000514271 RAD51CO43502 376 aa8.04□□□□□ -1.12
CLIP1-205ENST00000514271 PHACTR2O75167 634 aa8.04□□□□□ -1.12
CLIP1-205ENST00000514271 SSR1P43307 286 aaKnown RBP8.04□□□□□ -1.12
CLIP1-205ENST00000514271 GRM1Q13255 1194 aa8.04□□□□□ -1.12
CLIP1-205ENST00000514271 GRB10Q13322 594 aa8.04□□□□□ -1.12
CLIP1-205ENST00000514271 TSR1Q2NL82 804 aaKnown RBP8.04□□□□□ -1.12
CLIP1-205ENST00000514271 ACCSLQ4AC99 568 aa8.04□□□□□ -1.12
CLIP1-205ENST00000514271 VWA3BQ502W6 1294 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms