RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 COLQQ9Y215 455 aaPredicted RBP10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 PHLPP2Q6ZVD8 1323 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 FRMD3A2A2Y4 597 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 DENND3A2RUS2 1198 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 GRXCR1A8MXD5 290 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 GPR182O15218 404 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 ERLIN2O94905 339 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 PARNO95453 639 aaKnown RBP10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 MYBP10242 640 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 ACTN1P12814 892 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 CASP5P51878 434 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 NCKAP1LP55160 1127 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 PNOCQ13519 176 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 ZC2HC1CQ53FD0 456 aaPredicted RBP10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 SRGAP1Q7Z6B7 1085 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 RTN4RL1Q86UN2 441 aaPredicted RBP10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 FAM178BQ8IXR5 827 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 MYOCDQ8IZQ8 938 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 USP38Q8NB14 1042 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 TMEM161BQ8NDZ6 487 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 FIZ1Q96SL8 496 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 ADAM2Q99965 735 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 C7orf25Q9BPX7 421 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 C2orf40Q9H1Z8 148 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 ARHGAP28Q9P2N2 729 aa10.8□□□□□ -0.68
TOPBP1-209ENST00000513818 COL4A6Q14031 1691 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 TISP43B9A030 160 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 KLRC4O43908 158 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 TRAK2O60296 914 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 KINO60870 393 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 UPP2O95045 317 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 GCNT3O95395 438 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 MAPTP10636 758 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 HARSP12081 509 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 ARF4P18085 180 aaPredicted RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 GATMP50440 423 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 AMPD3Q01432 767 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 IKBKEQ14164 716 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 DSC3Q14574 896 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 POSTNQ15063 836 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 MAPK6Q16659 721 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 HERC4Q5GLZ8 1057 aaPredicted RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 NT5DC1Q5TFE4 455 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 EEF1DP3Q658K8 133 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 TWF2Q6IBS0 349 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 CCDC65Q8IXS2 484 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 TDHQ8IZJ6 230 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 RNF169Q8NCN4 708 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 GPT2Q8TD30 523 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 SPIRE2Q8WWL2 714 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 HERVK_113Q902F9 699 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 APBB2Q92870 758 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 EIF2AQ9BY44 585 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 NFKBIZQ9BYH8 718 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 MRPL44Q9H9J2 332 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 LARSQ9P2J5 1176 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 USP25Q9UHP3 1055 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 SQORQ9Y6N5 450 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 CNTNAP2Q9UHC6 1331 aa10.79□□□□□ -0.68
TOPBP1-209ENST00000513818 ABHD14A-ACY1A0A1B0GW23 586 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 MEIS3P2A8K0S8 358 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 ENPP3O14638 875 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 BAIAP3O94812 1187 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 PRPF6O94906 941 aaKnown RBP10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 NPTXRO95502 500 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 GAP43P17677 238 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 HOXA11P31270 313 aaPredicted RBP10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 KCNJ6P48051 423 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 RABGGTBP53611 331 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 CDC42EP1Q00587 391 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 KCNA1Q09470 495 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 DPYDQ12882 1025 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 PRPF4BQ13523 1007 aaKnown RBP10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 CAMK4Q16566 473 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 KMT5BQ4FZB7 885 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 FAM26FQ5R3K3 315 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 RASIP1Q5U651 963 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 SMYD5Q6GMV2 418 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 HAUS6Q7Z4H7 955 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 LPPQ93052 612 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 TARS2Q9BW92 718 aaKnown RBP10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 APOL6Q9BWW8 343 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 LRRC27Q9C0I9 530 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 FZD8Q9H461 694 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 PDZD7Q9H5P4 517 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 C17orf75Q9HAS0 396 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 EXOC1Q9NV70 894 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 PRMT7Q9NVM4 692 aaPredicted RBP10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 SLC4A7Q9Y6M7 1214 aa10.78□□□□□ -0.68
TOPBP1-209ENST00000513818 GOLGA6L22H0YM25 854 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 K7ERI5 159 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 ACKR2O00590 384 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 PPP1R37O75864 691 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 AMHP03971 560 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 RPN1P04843 607 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms