RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	PLA2G5	P39877	138 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	PTEN	P60484	403 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	MXD4	Q14582	209 aa	Predicted RBP	18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	SMC1A	Q14683	1233 aa	Known RBP	18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	ANKRD54	Q6NXT1	300 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	SYCE2	Q6PIF2	218 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	TMC7	Q7Z402	723 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	RNF135	Q8IUD6	432 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	MRPL43	Q8N983	215 aa	Known RBP	18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	PGBD4	Q96DM1	585 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	TMEM169	Q96HH4	297 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	S1PR5	Q9H228	398 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	NRDE2	Q9H7Z3	1164 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	TUFT1	Q9NNX1	390 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	HCN4	Q9Y3Q4	1203 aa		18.72	■□□□□ 0.59
MATR3-222	ENST00000513678	SRGAP2B	P0DMP2	458 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	MCM7	P33993	719 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	RARRES1	P49788	294 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	LONRF3	Q496Y0	759 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	IGSF21	Q96ID5	467 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	PHF7	Q9BWX1	381 aa	Predicted RBP	18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	ZBP1	Q9H171	429 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	UPF2	Q9HAU5	1272 aa	Known RBP	18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	MUTYH	Q9UIF7	546 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	INPP5F	Q9Y2H2	1132 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	IRAK3	Q9Y616	596 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	CNTNAP2	Q9UHC6	1331 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	TECTA	O75443	2155 aa		18.71	■□□□□ 0.59
MATR3-222	ENST00000513678	POTEM	A6NI47	508 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	TSPAN1	O60635	241 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	GALT	P07902	379 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	OR52Z1	P0C646	297 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	SPATA31C1	P0DKV0	1188 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	HOXB8	P17481	243 aa	Predicted RBP	18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	ARL2	P36404	184 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	CAPS	Q13938	189 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	ASAP3	Q8TDY4	903 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	NFKBIZ	Q9BYH8	718 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	RSAD1	Q9HA92	442 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	KIF3A	Q9Y496	699 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	HCFC2	Q9Y5Z7	792 aa		18.7	■□□□□ 0.58
MATR3-222	ENST00000513678	ZNF318	Q5VUA4	2279 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	INPPL1	O15357	1258 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	NCL	P19338	710 aa	Known RBP	18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	MUT	P22033	750 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	TEC	P42680	631 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	SLC11A1	P49279	550 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	AFF1	P51825	1210 aa	Known RBP	18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	AMHR2	Q16671	573 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	TTC38	Q5R3I4	469 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	DDX53	Q86TM3	631 aa	Known RBP	18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	ZNF280B	Q86YH2	543 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	VPS52	Q8N1B4	723 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	SMG8	Q8ND04	991 aa	Known RBP	18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	CASP10	Q92851	521 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	CCDC51	Q96ER9	411 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	VN1R3	Q9BXE9	311 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	DNAJB4	Q9UDY4	337 aa		18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	DBR1	Q9UK59	544 aa	Known RBP	18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	NOL7	Q9UMY1	257 aa	Known RBP	18.69	■□□□□ 0.58
MATR3-222	ENST00000513678	CLASP2	O75122	1294 aa	Known RBP	18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	ERLIN2	O94905	339 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	CTSA	P10619	480 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	ATP2B1	P20020	1258 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	GLRA2	P23416	452 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	RPA1	P27694	616 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	AXL	P30530	894 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	MCM2	P49736	904 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	MBTD1	Q05BQ5	628 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	TFDP1	Q14186	410 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	LLGL2	Q6P1M3	1020 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	CATSPER3	Q86XQ3	398 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	C4orf32	Q8N8J7	132 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	CNNM3	Q8NE01	707 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	URGCP	Q8TCY9	931 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	PIGO	Q8TEQ8	1089 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	NACC1	Q96RE7	527 aa		18.68	■□□□□ 0.58
MATR3-222	ENST00000513678	DDHD2	O94830	711 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	FXR2	P51116	673 aa	Known RBP eCLIP	18.67	■□□□□ 0.58	6e-6	■■■■□ 22.2
MATR3-222	ENST00000513678	RNASEL	Q05823	741 aa	Known RBP	18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	GNL2	Q13823	731 aa	Known RBP	18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	ZNF174	Q15697	407 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	NOTUM	Q6P988	496 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	ERMN	Q8TAM6	284 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	TMX3	Q96JJ7	454 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	TBC1D32	Q96NH3	1257 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	TMEM175	Q9BSA9	504 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	EIF2A	Q9BY44	585 aa	Known RBP	18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	KANSL3	Q9P2N6	904 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	IPP	Q9Y573	584 aa		18.67	■□□□□ 0.58
MATR3-222	ENST00000513678	ZDBF2	Q9HCK1	2354 aa		18.66	■□□□□ 0.58
MATR3-222	ENST00000513678	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.66	■□□□□ 0.58
MATR3-222	ENST00000513678	INO80B-WBP1	J3KQ70	363 aa		18.66	■□□□□ 0.58
MATR3-222	ENST00000513678	MED24	O75448	989 aa		18.66	■□□□□ 0.58
MATR3-222	ENST00000513678	CXCL14	O95715	111 aa		18.66	■□□□□ 0.58
MATR3-222	ENST00000513678	GIT2	Q14161	759 aa		18.66	■□□□□ 0.58
MATR3-222	ENST00000513678	BMS1	Q14692	1282 aa	Known RBP	18.66	■□□□□ 0.58
MATR3-222	ENST00000513678	MCPH1	Q8NEM0	835 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms