RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 COL10A1Q03692 680 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 TRIM25Q14258 630 aaKnown RBP3.38□□□□□ -1.87
PDGFC-208ENST00000512711 PDCD1Q15116 288 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 UBE3CQ15386 1083 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 TERF2Q15554 542 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 ESPNLQ6ZVH7 1005 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 HTR3DQ70Z44 454 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 XYLT1Q86Y38 959 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 SLC41A1Q8IVJ1 513 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 NIM1KQ8IY84 436 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 ZZZ3Q8IYH5 903 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 SYNPOQ8N3V7 929 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 OR5M3Q8NGP4 307 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 GAB3Q8WWW8 586 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 ST8SIA2Q92186 375 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 APPBP2Q92624 585 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 ARL8AQ96BM9 186 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 TTPALQ9BTX7 342 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 MLST8Q9BVC4 326 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 LSM14BQ9BX40 385 aaKnown RBP3.38□□□□□ -1.87
PDGFC-208ENST00000512711 NRDE2Q9H7Z3 1164 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 EVLQ9UI08 416 aaPredicted RBP3.38□□□□□ -1.87
PDGFC-208ENST00000512711 EDARQ9UNE0 448 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 PCDHB6Q9Y5E3 794 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 DMRT1Q9Y5R6 373 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 WDR33Q9C0J8 1336 aaKnown RBP3.38□□□□□ -1.87
PDGFC-208ENST00000512711 ZMYM3Q14202 1370 aa3.38□□□□□ -1.87
PDGFC-208ENST00000512711 A0A1W2PR48 441 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 FOXN1O15353 648 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 MTSS1O43312 755 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 FKBP9O95302 570 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 PEX11BO96011 259 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 ADH4P08319 380 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 CD40P25942 277 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 ID4P47928 161 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 FAM189BP81408 668 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 FSTL1Q12841 308 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 MAN2A1Q16706 1144 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 BROXQ5VW32 411 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 MBNL2Q5VZF2 373 aaKnown RBP3.37□□□□□ -1.87
PDGFC-208ENST00000512711 ANKS6Q68DC2 871 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 LAIR1Q6GTX8 287 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 ABHD15Q6UXT9 468 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 FKBP9P1Q75LS8 142 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 RHOUQ7L0Q8 258 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 TAS1R1Q7RTX1 841 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 ZNF276Q8N554 614 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 ZNF610Q8N9Z0 462 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 SLC25A43Q8WUT9 341 aaPredicted RBP3.37□□□□□ -1.87
PDGFC-208ENST00000512711 LEO1Q8WVC0 666 aaPredicted RBP3.37□□□□□ -1.87
PDGFC-208ENST00000512711 HAS1Q92839 578 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 HIST1H2AHQ96KK5 128 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 HIST1H2AJQ99878 128 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 CPPED1Q9BRF8 314 aaPredicted RBP3.37□□□□□ -1.87
PDGFC-208ENST00000512711 PRSS50Q9UI38 385 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 SORCS3Q9UPU3 1222 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 PPP2R3BQ9Y5P8 575 aa3.37□□□□□ -1.87
PDGFC-208ENST00000512711 COL4A3Q01955 1670 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 GSG1L2A8MUP6 293 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 GOLGA6L6A8MZA4 724 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 LEFTY2O00292 366 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 WNT10BO00744 389 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 DNAJC6O75061 913 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 SEC24DO94855 1032 aaPredicted RBP3.36□□□□□ -1.87
PDGFC-208ENST00000512711 GNAT2P19087 354 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 MANFP55145 182 aaKnown RBP3.36□□□□□ -1.87
PDGFC-208ENST00000512711 PHC1P78364 1004 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 MGAT5Q09328 741 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 MRPL49Q13405 166 aaKnown RBP3.36□□□□□ -1.87
PDGFC-208ENST00000512711 SMN1Q16637 294 aaKnown RBP3.36□□□□□ -1.87
PDGFC-208ENST00000512711 CT83Q5H943 113 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 NAIF1Q69YI7 327 aaPredicted RBP3.36□□□□□ -1.87
PDGFC-208ENST00000512711 MFSD5Q6N075 450 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 KIAA0907Q7Z7F0 614 aaPredicted RBP3.36□□□□□ -1.87
PDGFC-208ENST00000512711 MRGPRGQ86SM5 289 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 SYT12Q8IV01 421 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 PASD1Q8IV76 773 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 CMIPQ8IY22 773 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 LILRA3Q8N6C8 439 aaPredicted RBP3.36□□□□□ -1.87
PDGFC-208ENST00000512711 CDYL2Q8N8U2 506 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 CPT1CQ8TCG5 803 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 TEX101Q9BY14 249 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 EPC1Q9H2F5 836 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.36□□□□□ -1.87
PDGFC-208ENST00000512711 EMC7Q9NPA0 242 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 NUMBLQ9Y6R0 609 aa3.36□□□□□ -1.87
PDGFC-208ENST00000512711 LPXNO60711 386 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 RAMP2O60895 175 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 CDC45O75419 566 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 SCAF4O95104 1147 aaKnown RBP3.35□□□□□ -1.87
PDGFC-208ENST00000512711 LPLP06858 475 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 MYCLP1P12525 358 aaPredicted RBP3.35□□□□□ -1.87
PDGFC-208ENST00000512711 PROZP22891 400 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 CANXP27824 592 aaKnown RBP3.35□□□□□ -1.87
PDGFC-208ENST00000512711 APOBEC3AP31941 199 aaPredicted RBP3.35□□□□□ -1.87
PDGFC-208ENST00000512711 LSP1P33241 339 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 IL2P60568 153 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 PITRM1Q5JRX3 1037 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 GPR158Q5T848 1215 aa3.35□□□□□ -1.87
PDGFC-208ENST00000512711 CCDC62Q6P9F0 684 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms