RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PPP1R37O75864 691 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 PRKCBP05771 671 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 SFPQP23246 707 aaKnown RBP eCLIP11.91□□□□□ -0.5
PFDN1-204ENST00000512707 LIG4P49917 911 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 PTENP60484 403 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 MRPS6P82932 125 aaKnown RBP11.91□□□□□ -0.5
PFDN1-204ENST00000512707 BFSP2Q13515 415 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 KIZQ2M2Z5 673 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 EDRF1Q3B7T1 1238 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 SPATA1Q5VX52 437 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 CENPPQ6IPU0 288 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 NECAB2Q7Z6G3 386 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 RPAINQ86UA6 219 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 KSR1Q8IVT5 923 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 FAM114A1Q8IWE2 563 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 CSGALNACT2Q8N6G5 542 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 RNF214Q8ND24 703 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 GLIS3Q8NEA6 775 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 PRIMPOLQ96LW4 560 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 FDXACB1Q9BRP7 624 aaPredicted RBP11.91□□□□□ -0.5
PFDN1-204ENST00000512707 STRA6Q9BX79 667 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 MRPL4Q9BYD3 311 aaKnown RBP11.91□□□□□ -0.5
PFDN1-204ENST00000512707 FGFBP2Q9BYJ0 223 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 C11orf49Q9H6J7 331 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 CBX8Q9HC52 389 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 TRMT13Q9NUP7 481 aaKnown RBP11.91□□□□□ -0.5
PFDN1-204ENST00000512707 MAGEC2Q9UBF1 373 aaPredicted RBP11.91□□□□□ -0.5
PFDN1-204ENST00000512707 TRPV2Q9Y5S1 764 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 ADGRA3Q8IWK6 1321 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 TPM2P07951 284 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 THPOP40225 353 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 MATR3P43243 847 aaKnown RBP eCLIP11.9□□□□□ -0.53e-9■□□□□ 9.9
PFDN1-204ENST00000512707 CRYBB1P53674 252 aaPredicted RBP11.9□□□□□ -0.5
PFDN1-204ENST00000512707 STX17P56962 302 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 FKBP3Q00688 224 aaKnown RBP11.9□□□□□ -0.5
PFDN1-204ENST00000512707 TMEM62Q0P6H9 643 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 PRPF4BQ13523 1007 aaKnown RBP11.9□□□□□ -0.5
PFDN1-204ENST00000512707 HIC1Q14526 733 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 SLFN12LQ6IEE8 588 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 SLC39A5Q6ZMH5 540 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 CAGE1Q8TC20 777 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 PPP1R16BQ96T49 567 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 CELF4Q9BZC1 486 aaKnown RBP11.9□□□□□ -0.5
PFDN1-204ENST00000512707 TRAF3IP3Q9Y228 551 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 NFE2L3Q9Y4A8 694 aa11.9□□□□□ -0.5
PFDN1-204ENST00000512707 ACKR2O00590 384 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 KIAA0391O15091 583 aaKnown RBP11.89□□□□□ -0.51
PFDN1-204ENST00000512707 CETN3O15182 167 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 B4GALT4O60513 344 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 PQBP1O60828 265 aaKnown RBP11.89□□□□□ -0.51
PFDN1-204ENST00000512707 GNA14O95837 355 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 DARSP14868 501 aaKnown RBP11.89□□□□□ -0.51
PFDN1-204ENST00000512707 CDK11BP21127 795 aaKnown RBP11.89□□□□□ -0.51
PFDN1-204ENST00000512707 EIF4BP23588 611 aaKnown RBP11.89□□□□□ -0.51
PFDN1-204ENST00000512707 CDK7P50613 346 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 ATN1P54259 1190 aaPredicted RBP11.89□□□□□ -0.51
PFDN1-204ENST00000512707 MBTD1Q05BQ5 628 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 SPAG1Q07617 926 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 C1orf53Q5VUE5 145 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 ANKRD40Q6AI12 368 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 ARMCX5Q6P1M9 558 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 ZPBP2Q6X784 338 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 CATSPER4Q7RTX7 472 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 LUZP1Q86V48 1076 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 ANP32BQ92688 251 aaKnown RBP11.89□□□□□ -0.51
PFDN1-204ENST00000512707 ZNF668Q96K58 619 aaPredicted RBP11.89□□□□□ -0.51
PFDN1-204ENST00000512707 CEP63Q96MT8 703 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 TOX2Q96NM4 488 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 OSMRQ99650 979 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 CCDC113Q9H0I3 377 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 TRPV6Q9H1D0 765 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 ADAMTS10Q9H324 1103 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 THAP9Q9H5L6 903 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 IFT122Q9HBG6 1241 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 AGPAT3Q9NRZ7 376 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 FRMD4BQ9Y2L6 1034 aa11.89□□□□□ -0.51
PFDN1-204ENST00000512707 CNTNAP2Q9UHC6 1331 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 TRIM49BA6NDI0 452 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 GPR32O75388 356 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 TOM1L1O75674 476 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 PIGRP01833 764 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 NR3C1P04150 777 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 CTSHP09668 335 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 PYGBP11216 843 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 COL6A1P12109 1028 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 NR2F2P24468 414 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 AXLP30530 894 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 KCNA1Q09470 495 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 ADAM9Q13443 819 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 MYBPC2Q14324 1141 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 SNX17Q15036 470 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 IQCB1Q15051 598 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 NFIL3Q16649 462 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 FAM187BQ17R55 369 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 UVSSAQ2YD98 709 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 ZCWPW2Q504Y3 356 aa11.88□□□□□ -0.51
PFDN1-204ENST00000512707 ANKRD33Q7Z3H0 272 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms