RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 INPPL1O15357 1258 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 GALR2O43603 387 aaPredicted RBP14.04□□□□□ -0.16
VEGFA-216ENST00000512683 MARCH6O60337 910 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 LILRB3O75022 631 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
VEGFA-216ENST00000512683 HOXA11P31270 313 aaPredicted RBP14.04□□□□□ -0.16
VEGFA-216ENST00000512683 ANAPC15P60006 121 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 SCRN1Q12765 414 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 INF2Q27J81 1249 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 AGMOQ6ZNB7 445 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 GPR149Q86SP6 731 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 TDRD5Q8NAT2 981 aaKnown RBP14.04□□□□□ -0.16
VEGFA-216ENST00000512683 CMASQ8NFW8 434 aaPredicted RBP14.04□□□□□ -0.16
VEGFA-216ENST00000512683 HDAC7Q8WUI4 952 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 GJA10Q969M2 543 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 APOL5Q9BWW9 433 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 SFXN1Q9H9B4 322 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 RSAD1Q9HA92 442 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 TSHZ2Q9NRE2 1034 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 MRPL17Q9NRX2 175 aaKnown RBP14.04□□□□□ -0.16
VEGFA-216ENST00000512683 DBR1Q9UK59 544 aaKnown RBP14.04□□□□□ -0.16
VEGFA-216ENST00000512683 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
VEGFA-216ENST00000512683 EML1O00423 815 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 PFKFB2O60825 505 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 DTNBO60941 627 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 NR1I2O75469 434 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 LYPLA2O95372 231 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 SRGAP2CP0DJJ0 459 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.163e-10■□□□□ 9
VEGFA-216ENST00000512683 KLRC2P26717 231 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 YWHABP31946 246 aaKnown RBP14.03□□□□□ -0.16
VEGFA-216ENST00000512683 CA8P35219 290 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 SLC11A1P49279 550 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 ANKRD1Q15327 319 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 PTPN14Q15678 1187 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 RARS2Q5T160 578 aaKnown RBP14.03□□□□□ -0.16
VEGFA-216ENST00000512683 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
VEGFA-216ENST00000512683 KSR1Q8IVT5 923 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 LPPQ93052 612 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 KLHL5Q96PQ7 755 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 INPP5FQ9Y2H2 1132 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 STK36Q9NRP7 1315 aa14.03□□□□□ -0.16
VEGFA-216ENST00000512683 TMEM150BA6NC51 233 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 SLC37A4O43826 429 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 CTDNEP1O95476 244 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 SOD2P04179 222 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 EPCAMP16422 314 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 CLCN4P51793 760 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 AK2P54819 239 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 VCPP55072 806 aaKnown RBP14.02□□□□□ -0.17
VEGFA-216ENST00000512683 NPEPPSP55786 919 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 TFDP1Q14186 410 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 CCDC149Q6ZUS6 474 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 FERMT3Q86UX7 667 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 TMEM173Q86WV6 379 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-216ENST00000512683 ZNF280BQ86YH2 543 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 HACE1Q8IYU2 909 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 HAS1Q92839 578 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 ATOH1Q92858 354 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-216ENST00000512683 NXPE3Q969Y0 559 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 SH2D3AQ9BRG2 576 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 NFKBIZQ9BYH8 718 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 ANKEF1Q9NU02 776 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 IGSF9Q9P2J2 1179 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 LIMD1Q9UGP4 676 aa14.02□□□□□ -0.17
VEGFA-216ENST00000512683 FNDC1Q4ZHG4 1894 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-216ENST00000512683 NRP1O14786 923 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 CCNT1O60563 726 aaKnown RBP14.01□□□□□ -0.17
VEGFA-216ENST00000512683 DDHD2O94830 711 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 PAPLNO95428 1278 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 SEC24BO95487 1268 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 BRD1O95696 1058 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 CNPP09543 421 aaKnown RBP14.01□□□□□ -0.17
VEGFA-216ENST00000512683 ITGA4P13612 1032 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 PTENP60484 403 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 TDGQ13569 410 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 UBXN11Q5T124 520 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 PLA2G4FQ68DD2 849 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 ASTLQ6HA08 431 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-216ENST00000512683 NOTUMQ6P988 496 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 C12orf76Q8N812 135 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-216ENST00000512683 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 TMEM143Q96AN5 459 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 HSD17B14Q9BPX1 270 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 LXNQ9BS40 222 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 COLEC11Q9BWP8 271 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 RXFP1Q9HBX9 757 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 BRMS1Q9HCU9 246 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 GJB4Q9NTQ9 266 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 DNAJB4Q9UDY4 337 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 KCNJ14Q9UNX9 436 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 GIT1Q9Y2X7 761 aa14.01□□□□□ -0.17
VEGFA-216ENST00000512683 MEIS3P2A8K0S8 358 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 EIF5BO60841 1220 aaKnown RBP14□□□□□ -0.17
VEGFA-216ENST00000512683 DGAT1O75907 488 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 ERLIN2O94905 339 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 SLITRK3O94933 977 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 URODP06132 367 aa14□□□□□ -0.17
VEGFA-216ENST00000512683 ADH1AP07327 375 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms