RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 EP400NLQ6ZTU2 488 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 NPAS4Q8IUM7 802 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 FAM178BQ8IXR5 827 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 GJD3Q8N144 294 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 NEK9Q8TD19 979 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 CLP1Q92989 425 aaKnown RBP8.16□□□□□ -1.1
USP46-208ENST00000512656 UCN2Q96RP3 112 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 PCYT2Q99447 389 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 PLVAPQ9BX97 442 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 OSBPL7Q9BZF2 842 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 AGO4Q9HCK5 861 aaKnown RBP8.16□□□□□ -1.1
USP46-208ENST00000512656 TCEAL9Q9UHQ7 104 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 KLF15Q9UIH9 416 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 NAP1L2Q9ULW6 460 aaPredicted RBP8.16□□□□□ -1.1
USP46-208ENST00000512656 MYO7AQ13402 2215 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 IGSF9BQ9UPX0 1349 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 KDM3AQ9Y4C1 1321 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 KRBA1A5PL33 1030 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 PI4K2BG5E9Z4 385 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 STXBP3O00186 592 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 HBP1O60381 514 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 ATG7O95352 703 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 ARP10275 920 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 ALADP13716 330 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 COL8A1P27658 744 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 CLDN10P78369 228 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 AKAP17AQ02040 695 aaKnown RBP8.15□□□□□ -1.1
USP46-208ENST00000512656 PAK2Q13177 524 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 COL9A3Q14050 684 aaPredicted RBP8.15□□□□□ -1.1
USP46-208ENST00000512656 COL19A1Q14993 1142 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 NAALADL2Q58DX5 795 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 ZNF484Q5JVG2 852 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 MIS18BP1Q6P0N0 1132 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 CHSY3Q70JA7 882 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 PLA2G4DQ86XP0 818 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 CMTR2Q8IYT2 770 aaKnown RBP8.15□□□□□ -1.1
USP46-208ENST00000512656 SIX5Q8N196 739 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 TPCN2Q8NHX9 752 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.15□□□□□ -1.1
USP46-208ENST00000512656 CYP2W1Q8TAV3 490 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 ZNF689Q96CS4 500 aaPredicted RBP8.15□□□□□ -1.1
USP46-208ENST00000512656 FAM122AQ96E09 287 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 LRFN3Q9BTN0 628 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 CELF4Q9BZC1 486 aaKnown RBP8.15□□□□□ -1.1
USP46-208ENST00000512656 UPF3BQ9BZI7 483 aaKnown RBP8.15□□□□□ -1.1
USP46-208ENST00000512656 EPHX3Q9H6B9 360 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 C6orf50Q9HD87 102 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 TBC1D22BQ9NU19 505 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 CLDND1Q9NY35 253 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 PRKAG3Q9UGI9 489 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 BRPF3Q9ULD4 1205 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 LRFN2Q9ULH4 789 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 PADI3Q9ULW8 664 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 MUC6Q6W4X9 2439 aa8.15□□□□□ -1.1
USP46-208ENST00000512656 COL1A2P08123 1366 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 ESYT2A0FGR8 921 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 H3BQ06 376 aaPredicted RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 IPO5O00410 1097 aaKnown RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 DGKIO75912 1065 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 SCG2P13521 617 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 KLRC1P26715 233 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 GNA11P29992 359 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 PLA2G5P39877 138 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 METAP2P50579 478 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP46-208ENST00000512656 SETQ01105 290 aaPredicted RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 TMEM62Q0P6H9 643 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 ITGB3BPQ13352 177 aaPredicted RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 PFKFB3Q16875 520 aaPredicted RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 JAKMIP3Q5VZ66 844 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 MTHFD1LQ6UB35 978 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 ABHD15Q6UXT9 468 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 CKAP2LQ8IYA6 745 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 REXO1Q8N1G1 1221 aaKnown RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 BICD2Q8TD16 824 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 ATP8B4Q8TF62 1192 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 P2RX5Q93086 422 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 PGBD1Q96JS3 809 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 TCEANC2Q96MN5 208 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 POP1Q99575 1024 aaKnown RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 ZNF577Q9BSK1 485 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 AGO3Q9H9G7 860 aaKnown RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 RC3H2Q9HBD1 1191 aaKnown RBP8.14□□□□□ -1.11
USP46-208ENST00000512656 NEUROD4Q9HD90 331 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 ZNF302Q9NR11 478 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 ZNF232Q9UNY5 417 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 DOCK5Q9H7D0 1870 aa8.14□□□□□ -1.11
USP46-208ENST00000512656 IGKV6D-21A0A0A0MT36 114 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 DENND3A2RUS2 1198 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 DDX39AO00148 427 aaKnown RBP8.13□□□□□ -1.11
USP46-208ENST00000512656 GPR182O15218 404 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 GRM6O15303 877 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 RPS6KA5O75582 802 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 CCNE2O96020 404 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 MMP1P03956 469 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 PSAPP07602 524 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 CYP3A4P08684 503 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 IL9P15248 144 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 TMEM132AQ24JP5 1023 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 ADCK5Q3MIX3 580 aa8.13□□□□□ -1.11
USP46-208ENST00000512656 ZNF746Q6NUN9 644 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms