RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 V9GY48 417 aaPredicted RBP13.75□□□□□ -0.21
DDR1-267ENST00000512336 MAP1BP46821 2468 aaKnown RBP13.74□□□□□ -0.21
DDR1-267ENST00000512336 CACNA1IQ9P0X4 2223 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 ANHXE9PGG2 379 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 hCG_1984214I3L0E3 225 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 NRP1O14786 923 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 SPTLC1O15269 473 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 ALDH2P05091 517 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 SPATA31D3P0C874 917 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 LAMP2P13473 410 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 SDHBP21912 280 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 RAB27AP51159 221 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 STARD6P59095 220 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 TARBP2Q15633 366 aaKnown RBP13.74□□□□□ -0.21
DDR1-267ENST00000512336 ST3GAL2Q16842 350 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 PRR16Q569H4 304 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 KIAA0319Q5VV43 1072 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 ELMSAN1Q6PJG2 1045 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 SPATA31D4Q6ZUB0 917 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 CATSPER4Q7RTX7 472 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 ZNF713Q8N859 430 aaPredicted RBP13.74□□□□□ -0.21
DDR1-267ENST00000512336 PGBD4Q96DM1 585 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 FAM193BQ96PV7 902 aaPredicted RBP13.74□□□□□ -0.21
DDR1-267ENST00000512336 TMEM175Q9BSA9 504 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 PIDD1Q9HB75 910 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 DISC1Q9NRI5 854 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 RBM28Q9NW13 759 aaKnown RBP13.74□□□□□ -0.21
DDR1-267ENST00000512336 SPATA6Q9NWH7 488 aaPredicted RBP13.74□□□□□ -0.21
DDR1-267ENST00000512336 MARCH5Q9NX47 278 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 DPP7Q9UHL4 492 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 PRG3Q9Y2Y8 225 aaPredicted RBP13.74□□□□□ -0.21
DDR1-267ENST00000512336 PCDHB2Q9Y5E7 798 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 COL4A3Q01955 1670 aa13.74□□□□□ -0.21
DDR1-267ENST00000512336 DOCK8Q8NF50 2099 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 TMEM150BA6NC51 233 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 LAMTOR5O43504 91 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 CHMP2AO43633 222 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 POMCP01189 267 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 ZNF528Q3MIS6 628 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 MTERF2Q49AM1 385 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 APOA5Q6Q788 366 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 SYNE3Q6ZMZ3 975 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 SGMS1Q86VZ5 419 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 SH2D3AQ9BRG2 576 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 RPP25Q9BUL9 199 aaKnown RBP13.73□□□□□ -0.21
DDR1-267ENST00000512336 NT5C3AQ9H0P0 336 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 RSAD1Q9HA92 442 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDR1-267ENST00000512336 SEPT9Q9UHD8 586 aaPredicted RBP13.73□□□□□ -0.21
DDR1-267ENST00000512336 FBXO4Q9UKT5 387 aa13.73□□□□□ -0.21
DDR1-267ENST00000512336 CDV3Q9UKY7 258 aaKnown RBP13.73□□□□□ -0.21
DDR1-267ENST00000512336 DCDC2BA2VCK2 349 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 SLC27A2O14975 620 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 GLUD2P49448 558 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 GPC5P78333 572 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 CDC42EP1Q00587 391 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 LMNB2Q03252 620 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 CSTF1Q05048 431 aaKnown RBP13.72□□□□□ -0.21
DDR1-267ENST00000512336 SNW1Q13573 536 aaKnown RBP13.72□□□□□ -0.21
DDR1-267ENST00000512336 RTN1Q16799 776 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 RHPN2Q8IUC4 686 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 KSR1Q8IVT5 923 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 GPR161Q8N6U8 529 aaKnown RBP13.72□□□□□ -0.21
DDR1-267ENST00000512336 LENG9Q96B70 501 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 SHDQ96IW2 340 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 CEP89Q96ST8 783 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 BCO2Q9BYV7 579 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 INO80BQ9C086 356 aaPredicted RBP13.72□□□□□ -0.21
DDR1-267ENST00000512336 RXFP1Q9HBX9 757 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 SUCLA2Q9P2R7 463 aaPredicted RBP13.72□□□□□ -0.21
DDR1-267ENST00000512336 SMG5Q9UPR3 1016 aaKnown RBP13.72□□□□□ -0.21
DDR1-267ENST00000512336 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 CACNA1GO43497 2377 aa13.72□□□□□ -0.21
DDR1-267ENST00000512336 IGKV6-21A0A0C4DH24 114 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 KANSL1LA0AUZ9 987 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 PRR5-ARHGAP8B1AHC4 643 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 PAPLNO95428 1278 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 ANP32AP39687 249 aaKnown RBP13.71□□□□□ -0.21
DDR1-267ENST00000512336 OR1G1P47890 313 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 DNM2P50570 870 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 ARHGAP8P85298 464 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 MRPL10Q7Z7H8 261 aaKnown RBP13.71□□□□□ -0.21
DDR1-267ENST00000512336 RNF168Q8IYW5 571 aaPredicted RBP13.71□□□□□ -0.21
DDR1-267ENST00000512336 HDAC7Q8WUI4 952 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 ATRIPQ8WXE1 791 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 FGF14Q92915 247 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 PHKBQ93100 1093 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 BORCS6Q96GS4 357 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 NLRP4Q96MN2 994 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 PRKD2Q9BZL6 878 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 UNC45AQ9H3U1 944 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 PLEKHA4Q9H4M7 779 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 AGPAT5Q9NUQ2 364 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 MTF2Q9Y483 593 aaPredicted RBP13.71□□□□□ -0.21
DDR1-267ENST00000512336 PCDHGA2Q9Y5H1 932 aa13.71□□□□□ -0.21
DDR1-267ENST00000512336 WDR81Q562E7 1941 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms