RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MAN2A1Q16706 1144 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 ITPRIPL1Q6GPH6 555 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 P2RX5Q93086 422 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 KATNAL1Q9BW62 490 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TDRD3Q9H7E2 651 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 SEC31BQ9NQW1 1179 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 SRP68Q9UHB9 627 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 ATP1A1P05023 1023 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 CTSHP09668 335 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 PLS3P13797 630 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 MORF4L2Q15014 288 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 PLEKHM3Q6ZWE6 761 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 ACAD11Q709F0 780 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 STKLD1Q8NE28 680 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 MAML1Q92585 1016 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 VMP1Q96GC9 406 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 ZNF668Q96K58 619 aaPredicted RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 CLIC6Q96NY7 704 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TUBB6Q9BUF5 446 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 RNF26Q9BY78 433 aaPredicted RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 ING2Q9H160 280 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TMEM63CQ9P1W3 806 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 CAPN7Q9Y6W3 813 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 FER1L4A9Z1Z3 1794 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 UBE4BO95155 1302 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 CDHR2Q9BYE9 1310 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 LRRC53A6NM62 1247 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 GOLGA8MH3BSY2 632 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 M0QYV0 167 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 CACNB3P54284 484 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 NR1H3Q13133 447 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 SNX17Q15036 470 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 CRLF3Q8IUI8 442 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 RASEFQ8IZ41 740 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 FAM133AQ8N9E0 248 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 ZNF512Q96ME7 567 aaPredicted RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 TBC1D22BQ9NU19 505 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 ADAM22Q9P0K1 906 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 NFU1Q9UMS0 254 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 PIN4Q9Y237 131 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 ATP8A1Q9Y2Q0 1164 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 ECE2O60344 883 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 DTNBO60941 627 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 IGKV5-2P06315 115 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 GSNP06396 782 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 RALBP11234 206 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 SKIP12755 728 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 CMA1P23946 247 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 CDK17Q00537 523 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 APBA1Q02410 837 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TTC39CQ8N584 583 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 CCNYL1Q8N7R7 359 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 FBXO41Q8TF61 875 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 PARK7Q99497 189 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 VPS11Q9H270 941 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 ACAD9Q9H845 621 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 GIMAP4Q9NUV9 329 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TMEM161AQ9NX61 479 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 FBXL5Q9UKA1 691 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 SNX5Q9Y5X3 404 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 WDR19Q8NEZ3 1342 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TARSL2A2RTX5 802 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 PRR23AA6NEV1 266 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 PGRMC1O00264 195 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 DFFAO00273 331 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 LRG1P02750 347 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 COPS2P61201 443 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 KRT76Q01546 638 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 LRRC74AQ0VAA2 488 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 SREBF2Q12772 1141 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 SEPT2Q15019 361 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TSGA10IPQ3SY00 556 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 RABL6Q3YEC7 729 aaPredicted RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 FAM180AQ6UWF9 173 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 GLYCTKQ8IVS8 523 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 DCAF4Q8WV16 495 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 DYNLL2Q96FJ2 89 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 KIF12Q96FN5 646 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 MAGEB10Q96LZ2 347 aaPredicted RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 ELP3Q9H9T3 547 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 HACL1Q9UJ83 578 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 A0A1W2PQ27 194 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 A0A1W2PQ64 194 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 A0A1W2PQD8 194 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 FAM47E-STBD1D6RA91 191 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 KRT8P05787 483 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 IRF1P10914 325 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CYP2B6P20813 491 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CDK8P49336 464 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 AP1B1Q10567 949 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 NAALADL2Q58DX5 795 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 ANKRD40Q6AI12 368 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 NLRP10Q86W26 655 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 WDR75Q8IWA0 830 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 TTC13Q8NBP0 860 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CCDC197Q8NCU1 140 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CAPS2Q9BXY5 557 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 BHMT2Q9H2M3 363 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 SMARCAD1Q9H4L7 1026 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 ECT2Q9H8V3 914 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms