RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 PPP1R11O60927 126 aaPredicted RBP7.72□□□□□ -1.17
COPS4-209ENST00000511653 GJB5O95377 273 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 PCP11498 1178 aaKnown RBP7.72□□□□□ -1.17
COPS4-209ENST00000511653 TFE3P19532 575 aaPredicted RBP7.72□□□□□ -1.17
COPS4-209ENST00000511653 BMP6P22004 513 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 CHSY3Q70JA7 882 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 DGKHQ86XP1 1220 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 IL31RAQ8NI17 732 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 ZNF417Q8TAU3 575 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 NSUN6Q8TEA1 469 aaKnown RBP7.72□□□□□ -1.17
COPS4-209ENST00000511653 TTC9Q92623 222 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 RILPL2Q969X0 211 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 FAM122AQ96E09 287 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 TMEM74Q96NL1 305 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 ZNF587Q96SQ5 575 aaPredicted RBP7.72□□□□□ -1.17
COPS4-209ENST00000511653 C1QTNF1Q9BXJ1 281 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 SUGCTQ9HAC7 445 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 PXMP2Q9NR77 195 aa7.72□□□□□ -1.17
COPS4-209ENST00000511653 ZFHX2Q9C0A1 2572 aaPredicted RBP7.72□□□□□ -1.17
COPS4-209ENST00000511653 HAS3O00219 553 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 TM4SF5O14894 197 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 OIP5O43482 229 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 ECEL1O95672 775 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 B3GALT4O96024 378 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 CFBP00751 764 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 PF4P02776 101 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 HOXB4P17483 251 aaPredicted RBP7.71□□□□□ -1.18
COPS4-209ENST00000511653 SDSP20132 328 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 CASTP20810 708 aaKnown RBP7.71□□□□□ -1.18
COPS4-209ENST00000511653 CDC27P30260 824 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 ERVK-21P61565 698 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 PAK2Q13177 524 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 HDAC1Q13547 482 aaPredicted RBP7.71□□□□□ -1.18
COPS4-209ENST00000511653 STXBP2Q15833 593 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 DGKDQ16760 1214 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 KIAA0753Q2KHM9 967 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 SLC35G1Q2M3R5 365 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 HSDL1Q3SXM5 330 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 RPS26P11Q5JNZ5 115 aaPredicted RBP7.71□□□□□ -1.18
COPS4-209ENST00000511653 ZNF618Q5T7W0 954 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 ARHGEF16Q5VV41 709 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 PCNX4Q63HM2 1172 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 FBXL19Q6PCT2 694 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.71□□□□□ -1.187e-13■■■■■ 35.8
COPS4-209ENST00000511653 FBXO11Q86XK2 927 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 IL22RA1Q8N6P7 574 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 C7orf31Q8N865 590 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 GRIN3AQ8TCU5 1115 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 ZNF775Q96BV0 537 aaPredicted RBP7.71□□□□□ -1.18
COPS4-209ENST00000511653 BTBD6Q96KE9 485 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 C17orf80Q9BSJ5 609 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 IL25Q9H293 177 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 RNF41Q9H4P4 317 aaPredicted RBP7.71□□□□□ -1.18
COPS4-209ENST00000511653 BCAS3Q9H6U6 928 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 KAT14Q9H8E8 782 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 VAT1LQ9HCJ6 419 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 MRVI1Q9Y6F6 885 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 TECTAO75443 2155 aa7.71□□□□□ -1.18
COPS4-209ENST00000511653 B4DLN1 442 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 LINC01387J3KSC0 135 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 ZNF213O14771 459 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 DHX16O60231 1041 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 EIF3JO75822 258 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 CELA2BP08218 269 aaPredicted RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 UBA1P22314 1058 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 ALAS2P22557 587 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 HSD17B4P51659 736 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 MRPL12P52815 198 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 SP2Q02086 613 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 ASPRV1Q53RT3 343 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 CWC27Q6UX04 472 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 PPTC7Q8NI37 304 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 ANKS1AQ92625 1134 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 EAF1Q96JC9 268 aaPredicted RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 TGS1Q96RS0 853 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 IWS1Q96ST2 819 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 RAD9AQ99638 391 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 PDCD2LQ9BRP1 358 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 UBE2ZQ9H832 354 aaPredicted RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 ZSWIM5Q9P217 1185 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 RIF1Q5UIP0 2472 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 COL4A6Q14031 1691 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 TTC3P53804 2025 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 ABHD14A-ACY1A0A1B0GW23 586 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 GGPS1O95749 300 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 PARP1P09874 1014 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 MYCLP12524 364 aaPredicted RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 IL9P15248 144 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 HOXA13P31271 388 aaPredicted RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 GHRHRQ02643 423 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 IQCA1Q86XH1 822 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 TICAM2Q86XR7 235 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 MCF2L2Q86YR7 1114 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 RELL1Q8IUW5 271 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 DHX37Q8IY37 1157 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 DBF4BQ8NFT6 615 aa7.7□□□□□ -1.18
COPS4-209ENST00000511653 MRPL11Q9Y3B7 192 aaKnown RBP7.7□□□□□ -1.18
COPS4-209ENST00000511653 CTSBP07858 339 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 KCNA5P22460 613 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 EIF4A3P38919 411 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms