RNA–Protein interactions for RNA: ENST00000511130.6

CSNK1G3-206, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-206ENST00000511130 TSPAN1O60635 241 aa23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 PARNO95453 639 aaKnown RBP23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 PSMD2Q13200 908 aa23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 MAPK6Q16659 721 aa23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 C16orf59Q7L2K0 433 aa23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 EPM2AIP1Q7L775 607 aaPredicted RBP23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 USP38Q8NB14 1042 aa23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 CPB2Q96IY4 423 aa23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 IFIH1Q9BYX4 1025 aaKnown RBP23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 PRMT7Q9NVM4 692 aaPredicted RBP23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 TET1Q8NFU7 2136 aa23.31■■□□□ 1.32
CSNK1G3-206ENST00000511130 ACKR2O00590 384 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 GPR182O15218 404 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 MGEA5O60502 916 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 BMP6P22004 513 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 SFPQP23246 707 aaKnown RBP eCLIP23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 HOXD13P35453 343 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 FPGSQ05932 587 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 FAM187BQ17R55 369 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 PPP4R3CPQ6ZMV5 832 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 CDR2LQ86X02 465 aaPredicted RBP23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 SCFD1Q8WVM8 642 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 RMND1Q9NWS8 449 aa23.3■■□□□ 1.32
CSNK1G3-206ENST00000511130 H0YCG3 227 aa23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 ARF4P18085 180 aaPredicted RBP23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 HOXA11P31270 313 aaPredicted RBP23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 MORC3Q14149 939 aa23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 L1TD1Q5T7N2 865 aaKnown RBP23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 RBM43Q6ZSC3 357 aaKnown RBP23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 SEPT8Q92599 483 aa23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 KCNN1Q92952 543 aa23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 TARS2Q9BW92 718 aaKnown RBP23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 IL23AQ9NPF7 189 aa23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 MAPK8IP1Q9UQF2 711 aa23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 PCDHB13Q9Y5F0 798 aa23.29■■□□□ 1.32
CSNK1G3-206ENST00000511130 H0YGN5 161 aa23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 ERLIN2O94905 339 aa23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 STRN3Q13033 797 aa23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 PPIGQ13427 754 aaKnown RBP eCLIP23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 PRPF4BQ13523 1007 aaKnown RBP23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 SKOR2Q2VWA4 1001 aaPredicted RBP23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 ZNF658Q5TYW1 1059 aaPredicted RBP23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 RTN4RL1Q86UN2 441 aaPredicted RBP23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 NELFCDQ8IXH7 590 aa23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 SLC17A8Q8NDX2 589 aa23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 ZNF507Q8TCN5 953 aa23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 LINC01599Q8WXQ3 324 aa23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 LBHD1Q9BQE6 289 aaPredicted RBP23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 AGPAT5Q9NUQ2 364 aa23.28■■□□□ 1.32
CSNK1G3-206ENST00000511130 MAGEA10P43363 369 aaPredicted RBP23.27■■□□□ 1.32
CSNK1G3-206ENST00000511130 DSC3Q14574 896 aa23.27■■□□□ 1.32
CSNK1G3-206ENST00000511130 EEF1DP3Q658K8 133 aa23.27■■□□□ 1.32
CSNK1G3-206ENST00000511130 MAP4K3Q8IVH8 894 aa23.27■■□□□ 1.32
CSNK1G3-206ENST00000511130 PRIMPOLQ96LW4 560 aa23.27■■□□□ 1.32
CSNK1G3-206ENST00000511130 PIN4Q9Y237 131 aaKnown RBP23.27■■□□□ 1.32
CSNK1G3-206ENST00000511130 CNTNAP2Q9UHC6 1331 aa23.27■■□□□ 1.32
CSNK1G3-206ENST00000511130 TISP43B9A030 160 aa23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 ANKRD63C9JTQ0 380 aa23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 EIF3DO15371 548 aaKnown RBP eCLIP23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 SLC39A4Q6P5W5 647 aa23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 CNKSR3Q6P9H4 555 aa23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 RPUSD2Q8IZ73 545 aaKnown RBP23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 HVCN1Q96D96 273 aa23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 ZBTB45Q96K62 511 aaPredicted RBP23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 ACCSQ96QU6 501 aa23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 ACO2Q99798 780 aaKnown RBP23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 MRPL4Q9BYD3 311 aaKnown RBP23.27■■□□□ 1.31
CSNK1G3-206ENST00000511130 TNRC18O15417 2968 aaPredicted RBP23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 ZMYM2Q9UBW7 1377 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 CD44P16070 742 aaKnown RBP23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 PRCPP42785 496 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 ALCAMQ13740 583 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 BMT2Q1RMZ1 405 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 UBXN11Q5T124 520 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 ZNF365Q70YC5 407 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 SYAP1Q96A49 352 aaPredicted RBP23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 BICD1Q96G01 975 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 PDZD7Q9H5P4 517 aa23.26■■□□□ 1.31
CSNK1G3-206ENST00000511130 PIGRP01833 764 aa23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 SCP2P22307 547 aa23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 MLLT1Q03111 559 aaPredicted RBP23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 PCBP1Q15365 356 aaKnown RBP eCLIP23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 TMEM132AQ24JP5 1023 aa23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 ATF7IP2Q5U623 682 aa23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 STXBP4Q6ZWJ1 553 aa23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 ADAM2Q99965 735 aa23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 HAPLN2Q9GZV7 340 aa23.25■■□□□ 1.31
CSNK1G3-206ENST00000511130 A0A1B0GUA9 196 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 ENPP3O14638 875 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 ABLIM1O14639 778 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 AXLP30530 894 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 TMEM240Q5SV17 173 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 OTOP2Q7RTS6 562 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 SYCP3Q8IZU3 236 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 TRIML1Q8N9V2 468 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 APBB2Q92870 758 aa23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 EIF2AQ9BY44 585 aaKnown RBP23.24■■□□□ 1.31
CSNK1G3-206ENST00000511130 PTPRHQ9HD43 1115 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms