RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 NR1H3Q13133 447 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 IQCB1Q15051 598 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 LETM2Q2VYF4 491 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 Q4G0T1 1027 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 MTHFD1LQ6UB35 978 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 NEK8Q86SG6 692 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 ZBTB33Q86T24 672 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 RPAINQ86UA6 219 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 CKAP2LQ8IYA6 745 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 SMAP1Q8IYB5 467 aaPredicted RBP8.11□□□□□ -1.11
TRIO-213ENST00000509354 MICALL1Q8N3F8 863 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 IGSF22Q8N9C0 903 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 PHOSPHO2Q8TCD6 241 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 FAM200AQ8TCP9 573 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 GDPD5Q8WTR4 605 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 PPM1EQ8WY54 764 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 ARNTL2Q8WYA1 636 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 SEPT8Q92599 483 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 AK8Q96MA6 479 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 GAS2L1Q99501 681 aaPredicted RBP8.11□□□□□ -1.11
TRIO-213ENST00000509354 PYM1Q9BRP8 204 aaKnown RBP8.11□□□□□ -1.11
TRIO-213ENST00000509354 CCSER1Q9C0I3 900 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 CSRNP2Q9H175 543 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 AGO3Q9H9G7 860 aaKnown RBP8.11□□□□□ -1.11
TRIO-213ENST00000509354 DISC1Q9NRI5 854 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 DDX25Q9UHL0 483 aaKnown RBP8.11□□□□□ -1.11
TRIO-213ENST00000509354 MTUS1Q9ULD2 1270 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 KCNH3Q9ULD8 1083 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 SAMM50Q9Y512 469 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 PCDHA2Q9Y5H9 948 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 MAFBQ9Y5Q3 323 aaPredicted RBP8.11□□□□□ -1.11
TRIO-213ENST00000509354 TRPV2Q9Y5S1 764 aa8.11□□□□□ -1.11
TRIO-213ENST00000509354 COL1A2P08123 1366 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 A0A087X0B3 334 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 SMIM35A0A1B0GVV1 85 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 LINC01553A4QN01 128 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 EML1O00423 815 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 HBP1O60381 514 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 EFCAB14O75071 495 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 UPP2O95045 317 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 AMHP03971 560 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 VTNP04004 478 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 PSAPP07602 524 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 GCFC2P16383 781 aaKnown RBP8.1□□□□□ -1.11
TRIO-213ENST00000509354 IBSPP21815 317 aaPredicted RBP8.1□□□□□ -1.11
TRIO-213ENST00000509354 SLC19A1P41440 591 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 SLC26A2P50443 739 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 CLCN3P51790 818 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 ZNF174Q15697 407 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 CCDC85BQ15834 202 aaPredicted RBP8.1□□□□□ -1.11
TRIO-213ENST00000509354 TMEM266Q2M3C6 531 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 LONRF3Q496Y0 759 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 CT47A1Q5JQC4 288 aaPredicted RBP8.1□□□□□ -1.11
TRIO-213ENST00000509354 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 B3GNT9Q6UX72 402 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 TSHZ1Q6ZSZ6 1077 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 USP49Q70CQ1 688 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 MIER3Q7Z3K6 550 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 RSPH3Q86UC2 560 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 LRRC71Q8N4P6 559 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 TMEM40Q8WWA1 233 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 ZNF668Q96K58 619 aaPredicted RBP8.1□□□□□ -1.11
TRIO-213ENST00000509354 RIT2Q99578 217 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 NAP1L4Q99733 375 aaKnown RBP8.1□□□□□ -1.11
TRIO-213ENST00000509354 SH2D3AQ9BRG2 576 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 TMEM60Q9H2L4 133 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 VAV3Q9UKW4 847 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 PCDHA10Q9Y5I2 948 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 BDP1A6H8Y1 2624 aa8.1□□□□□ -1.11
TRIO-213ENST00000509354 TRIOO75962 3097 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 CCNT1O60563 726 aaKnown RBP8.09□□□□□ -1.11
TRIO-213ENST00000509354 SLFN14P0C7P3 912 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 JAK3P52333 1124 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 HTRA4P83105 476 aaPredicted RBP8.09□□□□□ -1.11
TRIO-213ENST00000509354 GRB10Q13322 594 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 PDIA5Q14554 519 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 CAMK4Q16566 473 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 KIZQ2M2Z5 673 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 ZNF484Q5JVG2 852 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 PLA2G4FQ68DD2 849 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRIO-213ENST00000509354 KIAA0319LQ8IZA0 1049 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 TRIML1Q8N9V2 468 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 BAP1Q92560 729 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 HAS1Q92839 578 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 RAD9AQ99638 391 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 C17orf80Q9BSJ5 609 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 PANK2Q9BZ23 570 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 CELF4Q9BZC1 486 aaKnown RBP8.09□□□□□ -1.11
TRIO-213ENST00000509354 KCNMB3Q9NPA1 279 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 ANO10Q9NW15 660 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 CDV3Q9UKY7 258 aaKnown RBP8.09□□□□□ -1.11
TRIO-213ENST00000509354 GINS2Q9Y248 185 aa8.09□□□□□ -1.11
TRIO-213ENST00000509354 MYH11P35749 1972 aa8.08□□□□□ -1.12
TRIO-213ENST00000509354 M0QZ92 97 aa8.08□□□□□ -1.12
TRIO-213ENST00000509354 TBX3O15119 743 aa8.08□□□□□ -1.12
TRIO-213ENST00000509354 MGEA5O60502 916 aa8.08□□□□□ -1.12
TRIO-213ENST00000509354 LPXNO60711 386 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms