RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 B4GALNT3Q6L9W6 998 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 TPRG1Q6ZUI0 275 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 MTSS1LQ765P7 747 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ZNF605Q86T29 641 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 DDX53Q86TM3 631 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 NLRX1Q86UT6 975 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 SLC39A11Q8N1S5 342 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ZNF511Q8NB15 262 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 GIMAP8Q8ND71 665 aaPredicted RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 RHPN1Q8TCX5 695 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 STK32AQ8WU08 396 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 SEPT1Q8WYJ6 367 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 NELL1Q92832 810 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 MAP4K1Q92918 833 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 FOXJ1Q92949 421 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 KIF1BPQ96EK5 621 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 CASD1Q96PB1 797 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 TMEM47Q9BQJ4 181 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 MRPL9Q9BYD2 267 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 ZBP1Q9H171 429 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 TMX1Q9H3N1 280 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 SMARCAD1Q9H4L7 1026 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 AZI2Q9H6S1 392 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ELAC1Q9H777 363 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 MAN1C1Q9NR34 630 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 IL17RBQ9NRM6 502 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 MRPL17Q9NRX2 175 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 RXFP3Q9NSD7 469 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 TCP11L1Q9NUJ3 509 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 MAP3K20Q9NYL2 800 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 RTEL1Q9NZ71 1219 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 STK39Q9UEW8 545 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 NDRG2Q9UN36 371 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 ST3GAL5Q9UNP4 418 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 SSX2IPQ9Y2D8 614 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ZFP37Q9Y6Q3 630 aaPredicted RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 IGSF9BQ9UPX0 1349 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 PLIN4Q96Q06 1357 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 ASH1LQ9NR48 2969 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 MBLAC1A4D2B0 266 aaPredicted RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 C4orf47A7E2U8 309 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 CHURC1-FNTBB4DL54 471 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 C9IYK1 514 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 GCOM1H8Y6P7 765 aaPredicted RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 MAN2B1O00754 1011 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 C2CD2LO14523 706 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 TM4SF5O14894 197 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 GIPC1O14908 333 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 RNF113AO15541 343 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 FIBPO43427 364 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 GAS2O43903 313 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 MGEA5O60502 916 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 N4BP1O75113 896 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 ZC3H11AO75152 810 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNF4-211ENST00000509206 GLUD1P00367 558 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 ADH1AP07327 375 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 ZFYP08048 801 aaPredicted RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 POLR2MP0CAP2 368 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 PDHBP11177 359 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 INSRRP14616 1297 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 ATP5JP18859 108 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 FSHRP23945 695 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 TARSP26639 723 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 HOXA13P31271 388 aaPredicted RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 FNTBP49356 437 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 CLCN4P51793 760 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 AK2P54819 239 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 RNASELQ05823 741 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 SLFN5Q08AF3 891 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 TRAF1Q13077 416 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 HTR4Q13639 388 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 COL28A1Q2UY09 1125 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 CRTC2Q53ET0 693 aaPredicted RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 SH3PXD2AQ5TCZ1 1133 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 KIAA1211LQ6NV74 962 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 LRRC55Q6ZSA7 311 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 LONP2Q86WA8 852 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 FTSJ3Q8IY81 847 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 FANCMQ8IYD8 2048 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 CMASQ8NFW8 434 aaPredicted RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 HELQQ8TDG4 1101 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 HNRNPLLQ8WVV9 542 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 APPBP2Q92624 585 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 GATA6Q92908 595 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 CLDN23Q96B33 292 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 LRIG1Q96JA1 1093 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 FAM193BQ96PV7 902 aaPredicted RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 IER2Q9BTL4 223 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 DDX23Q9BUQ8 820 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 PHF20Q9BVI0 1012 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 AMNQ9BXJ7 453 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 GBP3Q9H0R5 595 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 SLC32A1Q9H598 525 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 LMAN1LQ9HAT1 526 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 PLXNA4Q9HCM2 1894 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 PRMT8Q9NR22 394 aaPredicted RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 DOLKQ9UPQ8 538 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 NOC2LQ9Y3T9 749 aaKnown RBP4.42□□□□□ -1.7
RNF4-211ENST00000509206 PCDHA2Q9Y5H9 948 aa4.42□□□□□ -1.7
RNF4-211ENST00000509206 IRAK3Q9Y616 596 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms