RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 RTP1P59025 263 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 DPY19L2P1Q6NXN4 242 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 MIS18BP1Q6P0N0 1132 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 EMBQ6PCB8 327 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 KIFAP3Q92845 792 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 ACCSQ96QU6 501 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 PSMB7Q99436 277 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 LRRC1Q9BTT6 524 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 ASCC2Q9H1I8 757 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 INTUQ9ULD6 942 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 ZMYND10O75800 440 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 CCDC172P0C7W6 258 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 ABCD1P33897 745 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 STAT1P42224 750 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 APLP1P51693 650 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 JAM2P57087 298 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 ACTR2P61160 394 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 MOGSQ13724 837 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 ZNF571Q7Z3V5 609 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 SPIRE2Q8WWL2 714 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 KCNN1Q92952 543 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 NTPCRQ9BSD7 190 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 GABBR1Q9UBS5 961 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 KCNG1Q9UIX4 513 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 TLL2Q9Y6L7 1015 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 KIAA1217Q5T5P2 1943 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 IGSF9BQ9UPX0 1349 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 LOC102724159A0A0B4J2E5 919 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 GOLGA6BA6NDN3 693 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 ZNF862O60290 1169 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 N4BP1O75113 896 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 RNF40O75150 1001 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 CNMDO75829 334 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 DGAT1O75907 488 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 FTCDO95954 541 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 TGFB3P10600 412 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 SCP2P22307 547 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 RFX1P22670 979 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 SMTNP53814 917 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 TNNC1P63316 161 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 NNTQ13423 1086 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 PWP2Q15269 919 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 ALKBH5Q6P6C2 394 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 LEKR1Q6ZMV7 388 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 HAUS6Q7Z4H7 955 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 IFT20Q8IY31 132 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 SYCP3Q8IZU3 236 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 MCPH1Q8NEM0 835 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 MPHOSPH6Q99547 160 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 SIX2Q9NPC8 291 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 PDLIM7Q9NR12 457 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 MAFBQ9Y5Q3 323 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-203ENST00000508736 A0A0A6YYK5 440 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 CLSTN1O94985 981 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 SUPT20HL2P0C7V6 817 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 OSBPP22059 807 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 GJA5P36382 358 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 FMO5P49326 533 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 GYS2P54840 703 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 RPS6KA1Q15418 735 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 XKR3Q5GH77 459 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 SWSAP1Q6NVH7 229 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 RGMBQ6NW40 437 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 NCAPG2Q86XI2 1143 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 CCDC60Q8IWA6 550 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 GSPT2Q8IYD1 628 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 SYCE1Q8N0S2 351 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 PBKQ96KB5 322 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 EXOC7Q9UPT5 735 aa12.54□□□□□ -0.4
PRPF40B-203ENST00000508736 WDR81Q562E7 1941 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 IGKV6D-21A0A0A0MT36 114 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 H2AFZP0C0S5 128 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 MYBL2P10244 700 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 NOP2P46087 812 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 NPEPPSP55786 919 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 PEX3P56589 373 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 PAK2Q13177 524 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 GRM1Q13255 1194 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 DMP1Q13316 513 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 H2AFVQ71UI9 128 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 INTS8Q75QN2 995 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 KSR1Q8IVT5 923 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 CEP170P1Q96L14 293 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 FAM204AQ9H8W3 233 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
PRPF40B-203ENST00000508736 DMGDHQ9UI17 866 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms