RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 PLXDC1Q8IUK5 500 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 PHYKPLQ8IUZ5 450 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 LILRA3Q8N6C8 439 aaPredicted RBP4.8□□□□□ -1.64
GYPB-209ENST00000508618 KIAA1958Q8N8K9 716 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 UIMC1Q96RL1 719 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 CPPED1Q9BRF8 314 aaPredicted RBP4.8□□□□□ -1.64
GYPB-209ENST00000508618 SOX7Q9BT81 388 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 CLCA2Q9UQC9 943 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 M0R2C6 588 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 GLRX3O76003 335 aaKnown RBP4.79□□□□□ -1.64
GYPB-209ENST00000508618 KRT37O76014 449 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 ITGB6P18564 788 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 ZNF174Q15697 407 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 BEAN1Q3B7T3 259 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 C7orf31Q8N865 590 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 SLC9A6Q92581 669 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 HIST1H2AHQ96KK5 128 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 DEPDC7Q96QD5 511 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 HIST1H2AJQ99878 128 aa4.79□□□□□ -1.64
GYPB-209ENST00000508618 NCOA5Q9HCD5 579 aaKnown RBP4.79□□□□□ -1.64
GYPB-209ENST00000508618 LPXNO60711 386 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 ALDH1A2O94788 518 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 APOBEC3AP31941 199 aaPredicted RBP4.78□□□□□ -1.64
GYPB-209ENST00000508618 IGFALSP35858 605 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 FAM189BP81408 668 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 MRPL49Q13405 166 aaKnown RBP4.78□□□□□ -1.64
GYPB-209ENST00000508618 ERCC6LQ2NKX8 1250 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 PAPD7Q5XG87 772 aaKnown RBP4.78□□□□□ -1.64
GYPB-209ENST00000508618 TIGD7Q6NT04 549 aaPredicted RBP4.78□□□□□ -1.64
GYPB-209ENST00000508618 ESRP1Q6NXG1 681 aaKnown RBP4.78□□□□□ -1.64
GYPB-209ENST00000508618 GPRIN1Q7Z2K8 1008 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 ZZZ3Q8IYH5 903 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 ARMC5Q96C12 935 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 IL17RAQ96F46 866 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 LSM14BQ9BX40 385 aaKnown RBP4.78□□□□□ -1.64
GYPB-209ENST00000508618 AKIP1Q9NQ31 210 aa4.78□□□□□ -1.64
GYPB-209ENST00000508618 TNPO3Q9Y5L0 923 aaKnown RBP4.78□□□□□ -1.64
GYPB-209ENST00000508618 EPN1Q9Y6I3 576 aaPredicted RBP4.78□□□□□ -1.64
GYPB-209ENST00000508618 MARCH11A6NNE9 402 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 ZNF185O15231 689 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 HKR1P10072 659 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 SEC24CP53992 1094 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 DRICH1Q6PGQ1 229 aaPredicted RBP4.77□□□□□ -1.65
GYPB-209ENST00000508618 LCORLQ8N3X6 602 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 FAM98AQ8NCA5 519 aaKnown RBP4.77□□□□□ -1.65
GYPB-209ENST00000508618 WDR11Q9BZH6 1224 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 CABP5Q9NP86 173 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 ING3Q9NXR8 418 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 SNTG2Q9NY99 539 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 TRPM5Q9NZQ8 1165 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 SAMD15Q9P1V8 674 aa4.77□□□□□ -1.65
GYPB-209ENST00000508618 SPATA31A6Q5VVP1 1343 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 PTPDC1A2A3K4 754 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 PLD2O14939 933 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 NCR1O76036 304 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 SEC24DO94855 1032 aaPredicted RBP4.76□□□□□ -1.65
GYPB-209ENST00000508618 PRPF6O94906 941 aaKnown RBP4.76□□□□□ -1.65
GYPB-209ENST00000508618 C1RP00736 705 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 CFBP00751 764 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 ZSCAN20P17040 1043 aaPredicted RBP4.76□□□□□ -1.65
GYPB-209ENST00000508618 PTX3P26022 381 aaPredicted RBP4.76□□□□□ -1.65
GYPB-209ENST00000508618 RANGAP1P46060 587 aaPredicted RBP4.76□□□□□ -1.65
GYPB-209ENST00000508618 ELLP55199 621 aaPredicted RBP4.76□□□□□ -1.65
GYPB-209ENST00000508618 ABHD17BQ5VST6 288 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 CREB3L3Q68CJ9 461 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 ARMC6Q6NXE6 501 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 FBXO42Q6P3S6 717 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 PIK3C3Q8NEB9 887 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 NOL10Q9BSC4 688 aaKnown RBP4.76□□□□□ -1.65
GYPB-209ENST00000508618 HIRIP3Q9BW71 556 aaPredicted RBP4.76□□□□□ -1.65
GYPB-209ENST00000508618 IGSF5Q9NSI5 407 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 ANKFY1Q9P2R3 1169 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 B4GALT6Q9UBX8 382 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 SPO11Q9Y5K1 396 aa4.76□□□□□ -1.65
GYPB-209ENST00000508618 PIPSLA2A3N6 862 aa4.75□□□□□ -1.65
GYPB-209ENST00000508618 ASLP04424 464 aa4.75□□□□□ -1.65
GYPB-209ENST00000508618 ERBB2P04626 1255 aa4.75□□□□□ -1.65
GYPB-209ENST00000508618 GZMKP49863 264 aa4.75□□□□□ -1.65
GYPB-209ENST00000508618 C2orf27AQ580R0 203 aa4.75□□□□□ -1.65
GYPB-209ENST00000508618 CCDC178Q5BJE1 867 aa4.75□□□□□ -1.65
GYPB-209ENST00000508618 SIMC1Q8NDZ2 872 aa4.75□□□□□ -1.65
GYPB-209ENST00000508618 MYL10Q9BUA6 226 aa4.75□□□□□ -1.65
GYPB-209ENST00000508618 ALG13Q9NP73 1137 aaKnown RBP4.75□□□□□ -1.65
GYPB-209ENST00000508618 USP36Q9P275 1121 aaKnown RBP4.75□□□□□ -1.65
GYPB-209ENST00000508618 FAM221BA6H8Z2 402 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 PRR5-ARHGAP8B1AHC4 643 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 CASRP41180 1078 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 GUCY1B3Q02153 619 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 DDB1Q16531 1140 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 CDYL2Q8N8U2 506 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 OR5M3Q8NGP4 307 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 ELF4Q99607 663 aaPredicted RBP4.74□□□□□ -1.65
GYPB-209ENST00000508618 EPC1Q9H2F5 836 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 POFUT1Q9H488 388 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 HDAC5Q9UQL6 1122 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 PCDHB6Q9Y5E3 794 aa4.74□□□□□ -1.65
GYPB-209ENST00000508618 CBX4O00257 560 aa4.73□□□□□ -1.65
GYPB-209ENST00000508618 LY86O95711 162 aa4.73□□□□□ -1.65
GYPB-209ENST00000508618 HLA-DOAP06340 250 aa4.73□□□□□ -1.65
GYPB-209ENST00000508618 SPATA31D3P0C874 917 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms