RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 ADAMTS10Q9H324 1103 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 HIPK3Q9H422 1215 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 TRIP12Q14669 1992 aaPredicted RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 FGFR1OPO95684 399 aaKnown RBP12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 CD4P01730 458 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 CLTBP09497 229 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 SELPP16109 830 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 CCNE1P24864 410 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 ERCC5P28715 1186 aaPredicted RBP12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 MBTD1Q05BQ5 628 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 NFX1Q12986 1120 aaKnown RBP12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 SNX17Q15036 470 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 ZNF618Q5T7W0 954 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 MAP4K3Q8IVH8 894 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 AOPEPQ8N6M6 819 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 WNT8BQ93098 351 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 HTATIP2Q9BUP3 242 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 PPP1R12CQ9BZL4 782 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 CDHR5Q9HBB8 845 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 IFT122Q9HBG6 1241 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 TYW1Q9NV66 732 aaKnown RBP12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 CGNQ9P2M7 1197 aaKnown RBP12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 RWDD2AQ9UIY3 292 aa12.09□□□□□ -0.47
BRCC3P1-201ENST00000508559 CENPFP49454 3210 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 ACKR2O00590 384 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 PDXKO00764 312 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 GPR182O15218 404 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 CHRNA1P02708 482 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 GHRP10912 638 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 HARSP12081 509 aaKnown RBP12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 FGFR4P22455 802 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 RPL13P26373 211 aaKnown RBP12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 CYP2J2P51589 502 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 LRRC63Q05C16 580 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 KCNA1Q09470 495 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 PAK2Q13177 524 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 HSP90AA2PQ14568 343 aaPredicted RBP12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 PCBP1Q15365 356 aaKnown RBP eCLIP12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 BMT2Q1RMZ1 405 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 TRIM71Q2Q1W2 868 aaKnown RBP12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 SLFN12LQ6IEE8 588 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 ARMCX5Q6P1M9 558 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 LRRC8DQ7L1W4 858 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 POMGNT1Q8WZA1 660 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 CTAGE1Q96RT6 745 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 ADPGKQ9BRR6 497 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 FUCA2Q9BTY2 467 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 TARS2Q9BW92 718 aaKnown RBP12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 MINDY3Q9H8M7 445 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 ANKFY1Q9P2R3 1169 aa12.08□□□□□ -0.48
BRCC3P1-201ENST00000508559 PITPNM1O00562 1244 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 N4BP3O15049 544 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 CETN3O15182 167 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 CLIC2O15247 247 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 CLDN3O15551 220 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 PPP1R37O75864 691 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 RAG1P15918 1043 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 ZSCAN20P17040 1043 aaPredicted RBP12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 SNRPFP62306 86 aaKnown RBP12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 MYL5Q02045 173 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 FAM187BQ17R55 369 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 FAM26DQ5JW98 314 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 FBXO47Q5MNV8 452 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 ATF7IP2Q5U623 682 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 CENPPQ6IPU0 288 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 ZPBP2Q6X784 338 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 ZBTB33Q86T24 672 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 CSGALNACT2Q8N6G5 542 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 USP38Q8NB14 1042 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 RNF214Q8ND24 703 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 FAM200AQ8TCP9 573 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 CPB2Q96IY4 423 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 NOC4LQ9BVI4 516 aaKnown RBP12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 STRA6Q9BX79 667 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 TRIM6Q9C030 488 aaPredicted RBP12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 CCDC113Q9H0I3 377 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 FZD8Q9H461 694 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 MAGEC2Q9UBF1 373 aaPredicted RBP12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 PIN4Q9Y237 131 aaKnown RBP12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 FRMD4BQ9Y2L6 1034 aa12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 NOC2LQ9Y3T9 749 aaKnown RBP12.07□□□□□ -0.48
BRCC3P1-201ENST00000508559 TRIM49BA6NDI0 452 aa12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 B4GALT5O43286 388 aa12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 TSPAN1O60635 241 aa12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 EXOC3O60645 756 aa12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 TOM1L1O75674 476 aa12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 PARNO95453 639 aaKnown RBP12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 NR3C1P04150 777 aa12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 CDK11BP21127 795 aaKnown RBP12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 IBSPP21815 317 aaPredicted RBP12.06□□□□□ -0.48
BRCC3P1-201ENST00000508559 NR2F2P24468 414 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms