RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 RGL1Q9NZL6 768 aa7.22□□□□□ -1.25
HMGN1P16-201ENST00000508308 DNAJB4Q9UDY4 337 aa7.22□□□□□ -1.25
HMGN1P16-201ENST00000508308 VPS9D1Q9Y2B5 631 aa7.22□□□□□ -1.25
HMGN1P16-201ENST00000508308 HCFC2Q9Y5Z7 792 aa7.22□□□□□ -1.25
HMGN1P16-201ENST00000508308 FRYLO94915 3013 aa7.21□□□□□ -1.25
HMGN1P16-201ENST00000508308 OFD1O75665 1012 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 DDHD2O94830 711 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 LARGE1O95461 756 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 GALTP07902 379 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 WEE2P0C1S8 567 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 PPM1AP35813 382 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 QARSP47897 775 aaKnown RBP7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 SLC11A1P49279 550 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 CDC42EP1Q00587 391 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 NR5A1Q13285 461 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 AGMOQ6ZNB7 445 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 TMC7Q7Z402 723 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 MRPL10Q7Z7H8 261 aaKnown RBP7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 NEK8Q86SG6 692 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 ALYREFQ86V81 257 aaKnown RBP7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 ZNF410Q86VK4 478 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 ABI1Q8IZP0 508 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 C12orf76Q8N812 135 aaPredicted RBP7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 PRSS33Q8NF86 280 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 SLC22A17Q8WUG5 538 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 TMEM143Q96AN5 459 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 IGSF21Q96ID5 467 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 FAM20AQ96MK3 541 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 NLRP4Q96MN2 994 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 SCLT1Q96NL6 688 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 ZBP1Q9H171 429 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 NRDE2Q9H7Z3 1164 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 XPNPEP1Q9NQW7 623 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 AGPAT5Q9NUQ2 364 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 FAM105AQ9NUU6 356 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 DACT1Q9NYF0 836 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 PUF60Q9UHX1 559 aaKnown RBP7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 PIN4Q9Y237 131 aaKnown RBP7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 COL4A3BPQ9Y5P4 624 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 IRAK3Q9Y616 596 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 STK36Q9NRP7 1315 aa7.21□□□□□ -1.26
HMGN1P16-201ENST00000508308 SPTBN4Q9H254 2564 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 DENND4AQ7Z401 1863 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 TBX3O15119 743 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 CCNT1O60563 726 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 LILRB3O75022 631 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 ZC3H11AO75152 810 aaKnown RBP eCLIP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 SLITRK3O94933 977 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 CXCL14O95715 111 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 EFEMP2O95967 443 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 PDGFBP01127 241 aaPredicted RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 EPCAMP16422 314 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 HOXB8P17481 243 aaPredicted RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 SFPQP23246 707 aaKnown RBP eCLIP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 SP100P23497 879 aaPredicted RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 ALDH7A1P49419 539 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 DNM2P50570 870 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 AK2P54819 239 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 KRT17Q04695 432 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 LAMTOR4Q0VGL1 99 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 ST3GAL1Q11201 340 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 TCF15Q12870 199 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 SMC1AQ14683 1233 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 EPHA7Q15375 998 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 ME3Q16798 604 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 PTPN21Q16825 1174 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 NOMO2Q5JPE7 1267 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 TWF2Q6IBS0 349 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 PIK3AP1Q6ZUJ8 805 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 CATSPER4Q7RTX7 472 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 DDX53Q86TM3 631 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 C4orf19Q8IY42 314 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 VPS52Q8N1B4 723 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 NECAB1Q8N987 351 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 SMG8Q8ND04 991 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 PBXIP1Q96AQ6 731 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 DYDC2Q96IM9 177 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 MFSD14AQ96MC6 490 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 HSD17B14Q9BPX1 270 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 LXNQ9BS40 222 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 MRPL9Q9BYD2 267 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 KCNH6Q9H252 994 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 ADAM7Q9H2U9 754 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 SMOC2Q9H3U7 446 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 POMKQ9H5K3 350 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 PCDHB2Q9Y5E7 798 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 C2orf16Q68DN1 1984 aa7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 RIF1Q5UIP0 2472 aaKnown RBP7.2□□□□□ -1.26
HMGN1P16-201ENST00000508308 ZNF292O60281 2723 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 A0A087WWV3 80 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 CCDC194A0A1B0GVG4 234 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 FSD2A1L4K1 749 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 C2CD4DB7Z1M9 353 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 F8W810 466 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 JAK2O60674 1132 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 BRD1O95696 1058 aa7.19□□□□□ -1.26
HMGN1P16-201ENST00000508308 SRGAP2CP0DJJ0 459 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms