RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ZMYM2Q9UBW7 1377 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 FGF18O76093 207 aa21.98■■□□□ 1.11
SFXN1-209ENST00000508290 KRT17Q04695 432 aa21.98■■□□□ 1.11
SFXN1-209ENST00000508290 RESTQ13127 1097 aa21.98■■□□□ 1.11
SFXN1-209ENST00000508290 AMHR2Q16671 573 aa21.98■■□□□ 1.11
SFXN1-209ENST00000508290 NOMO2Q5JPE7 1267 aa21.98■■□□□ 1.11
SFXN1-209ENST00000508290 TRIM6Q9C030 488 aaPredicted RBP21.98■■□□□ 1.11
SFXN1-209ENST00000508290 FZD8Q9H461 694 aa21.98■■□□□ 1.11
SFXN1-209ENST00000508290 ALG13Q9NP73 1137 aaKnown RBP21.98■■□□□ 1.11
SFXN1-209ENST00000508290 A0A1B0GUA9 196 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 ARF4P18085 180 aaPredicted RBP21.97■■□□□ 1.11
SFXN1-209ENST00000508290 GUCY2CP25092 1073 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 CDC25AP30304 524 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 ALDH7A1P49419 539 aaKnown RBP21.97■■□□□ 1.11
SFXN1-209ENST00000508290 COL19A1Q14993 1142 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 UBXN11Q5T124 520 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 SLC27A1Q6PCB7 646 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 KCNT2Q6UVM3 1135 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 CABP7Q86V35 215 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 POF1BQ8WVV4 589 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 RSAD1Q9HA92 442 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 MTMR6Q9Y217 621 aa21.97■■□□□ 1.11
SFXN1-209ENST00000508290 FNDC1Q4ZHG4 1894 aaPredicted RBP21.96■■□□□ 1.11
SFXN1-209ENST00000508290 E9PMD0 336 aa21.96■■□□□ 1.11
SFXN1-209ENST00000508290 ITGA4P13612 1032 aa21.96■■□□□ 1.11
SFXN1-209ENST00000508290 TMEM119Q4V9L6 283 aa21.96■■□□□ 1.11
SFXN1-209ENST00000508290 LRRC55Q6ZSA7 311 aa21.96■■□□□ 1.11
SFXN1-209ENST00000508290 APBB1IPQ7Z5R6 666 aaPredicted RBP21.96■■□□□ 1.11
SFXN1-209ENST00000508290 SYT2Q8N9I0 419 aaPredicted RBP21.96■■□□□ 1.11
SFXN1-209ENST00000508290 PABPC5Q96DU9 382 aaKnown RBP21.96■■□□□ 1.11
SFXN1-209ENST00000508290 UBE2ZQ9H832 354 aaPredicted RBP21.96■■□□□ 1.11
SFXN1-209ENST00000508290 PRDM6Q9NQX0 595 aa21.96■■□□□ 1.11
SFXN1-209ENST00000508290 SPG21Q9NZD8 308 aa21.96■■□□□ 1.11
SFXN1-209ENST00000508290 RBM19Q9Y4C8 960 aaKnown RBP21.96■■□□□ 1.11
SFXN1-209ENST00000508290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.95■■□□□ 1.1
SFXN1-209ENST00000508290 ACKR2O00590 384 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 INPPL1O15357 1258 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 OFD1O75665 1012 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 SCP2P22307 547 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 RNASELQ05823 741 aaKnown RBP21.95■■□□□ 1.1
SFXN1-209ENST00000508290 DMP1Q13316 513 aaPredicted RBP21.95■■□□□ 1.1
SFXN1-209ENST00000508290 BMS1Q14692 1282 aaKnown RBP21.95■■□□□ 1.1
SFXN1-209ENST00000508290 ZRSR1Q15695 479 aaKnown RBP21.95■■□□□ 1.1
SFXN1-209ENST00000508290 TCEAL5Q5H9L2 206 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 RINT1Q6NUQ1 792 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 AGMOQ6ZNB7 445 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 MRPS27Q92552 414 aaKnown RBP21.95■■□□□ 1.1
SFXN1-209ENST00000508290 TLR9Q9NR96 1032 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 IPPQ9Y573 584 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 UNC80Q8N2C7 3258 aa21.95■■□□□ 1.1
SFXN1-209ENST00000508290 N4BP3O15049 544 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 PRPF4BQ13523 1007 aaKnown RBP21.94■■□□□ 1.1
SFXN1-209ENST00000508290 PUS10Q3MIT2 529 aaKnown RBP21.94■■□□□ 1.1
SFXN1-209ENST00000508290 C1orf186Q6ZWK4 172 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 RASSF8Q8NHQ8 419 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 BSNDQ8WZ55 320 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 LPPQ93052 612 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 PNMA5Q96PV4 448 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 ADPGKQ9BRR6 497 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 CCDC113Q9H0I3 377 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 NGRNQ9NPE2 291 aaKnown RBP21.94■■□□□ 1.1
SFXN1-209ENST00000508290 TBC1D13Q9NVG8 400 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 GIT1Q9Y2X7 761 aa21.94■■□□□ 1.1
SFXN1-209ENST00000508290 PRUNE2Q8WUY3 3088 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 PRKCBP05771 671 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 TXLNAP40222 546 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 CAMK1Q14012 370 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 PTPAQ15257 358 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 TMEM132AQ24JP5 1023 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 SLC39A11Q8N1S5 342 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 SMG8Q8ND04 991 aaKnown RBP21.93■■□□□ 1.1
SFXN1-209ENST00000508290 TMEM169Q96HH4 297 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 CPB2Q96IY4 423 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 CDCA3Q99618 268 aaPredicted RBP21.93■■□□□ 1.1
SFXN1-209ENST00000508290 TMEM175Q9BSA9 504 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 CCSER1Q9C0I3 900 aa21.93■■□□□ 1.1
SFXN1-209ENST00000508290 SRPRBQ9Y5M8 271 aaKnown RBP21.93■■□□□ 1.1
SFXN1-209ENST00000508290 H0YCG3 227 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 K7ERI5 159 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 DLL1O00548 723 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 B4GALT5O43286 388 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 HIP1RO75146 1068 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 PLA2G4BP0C869 781 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 SMTNP53814 917 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 SLC12A3P55017 1021 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 BCAR1P56945 870 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 KCNK18Q7Z418 384 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 SPIRE2Q8WWL2 714 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 FAM193BQ96PV7 902 aaPredicted RBP21.92■■□□□ 1.1
SFXN1-209ENST00000508290 NTPCRQ9BSD7 190 aaKnown RBP21.92■■□□□ 1.1
SFXN1-209ENST00000508290 RUSC1Q9BVN2 902 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 EIF2AQ9BY44 585 aaKnown RBP21.92■■□□□ 1.1
SFXN1-209ENST00000508290 TMEM134Q9H6X4 195 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 FOXD4L1Q9NU39 408 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 ODF2LQ9ULJ1 636 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 FAM50BQ9Y247 325 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 INPP5FQ9Y2H2 1132 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 CLIC4Q9Y696 253 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 KIAA1671Q9BY89 1806 aa21.92■■□□□ 1.1
SFXN1-209ENST00000508290 ZC3H11AO75152 810 aaKnown RBP eCLIP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms