RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 MAEAQ7L5Y9 396 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 ALLCQ8N6M5 410 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 SVIPQ8NHG7 77 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 LPIN3Q9BQK8 851 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 TLE6Q9H808 572 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 PLK2Q9NYY3 685 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 ZNF212Q9UDV6 495 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 MTRF1LQ9UGC7 380 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 CHIC2Q9UKJ5 165 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 ERVK-11Q9UQG0 969 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 COQ6Q9Y2Z9 468 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 A0A0G2JS52 829 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 SOWAHDA6NJG2 315 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 CCDC169A6NNP5 214 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 GOLGA8BA8MQT2 603 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 NDC80O14777 642 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 SNX3O60493 162 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ADD1P35611 737 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 AMPD3Q01432 767 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 EN1Q05925 392 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ACAP1Q15027 740 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 GPR162Q16538 588 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 LONRF1Q17RB8 773 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ODF2Q5BJF6 829 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 TMTC3Q6ZXV5 915 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ACAD11Q709F0 780 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 TMC7Q7Z402 723 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ABTB2Q8N961 1025 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 LRRC8CQ8TDW0 803 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 NOC3LQ8WTT2 800 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 TTC9Q92623 222 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 PLVAPQ9BX97 442 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 AGXT2Q9BYV1 514 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 CAAP1Q9H8G2 361 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 EHMT1Q9H9B1 1298 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 SCPEP1Q9HB40 452 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 USP29Q9HBJ7 922 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 PPP1R1BQ9UD71 204 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 TBK1Q9UHD2 729 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 WNK3Q9BYP7 1800 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ACEP12821 1306 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 UMODL1Q5DID0 1318 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ARHGAP10A1A4S6 786 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 H0YGN5 161 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 HNRNPCL1O60812 293 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 GUCY1B2O75343 617 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 LARGE1O95461 756 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 SLC1A1P43005 524 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ATP6V0D1P61421 351 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 HNRNPDQ14103 355 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 ANKRD1Q15327 319 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 WASHC4Q2M389 1173 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 CCNJQ5T5M9 372 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 C1orf228Q6PIY5 440 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 VPS52Q8N1B4 723 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 EXD1Q8NHP7 514 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 NELFBQ8WX92 580 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 TLCD1Q96CP7 247 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 DDX47Q9H0S4 455 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 SNX25Q9H3E2 840 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 SELENONQ9NZV5 590 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 VANGL2Q9ULK5 521 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 NFS1Q9Y697 457 aa11.54□□□□□ -0.56
PDLIM5-210ENST00000508216 TTC37Q6PGP7 1564 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 A0A1B0GTH6 734 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 PHF20L1A8MW92 1017 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 SULT1B1O43704 296 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 MFAP3LO75121 409 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 RSL1D1O76021 490 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 TOMM70O94826 608 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 EGFRP00533 1210 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 TFRCP02786 760 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 SLC3A2P08195 630 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 ENO2P09104 434 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 PBX1P40424 430 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 STAT3P40763 770 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 SP140Q13342 867 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 GNA13Q14344 377 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 MTF1Q14872 753 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 STILQ15468 1287 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 FAM133BQ5BKY9 247 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 RWDD4Q6NW29 188 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 KIF6Q6ZMV9 814 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 ZC3H18Q86VM9 953 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 USP38Q8NB14 1042 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 KCNG4Q8TDN1 519 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 UTP4Q969X6 686 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 MTMR9Q96QG7 549 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 OLFM1Q99784 485 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 API5Q9BZZ5 524 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 RBM38Q9H0Z9 239 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 MRGBPQ9NV56 204 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 ZDHHC7Q9NXF8 308 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 DNAJB4Q9UDY4 337 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 DMGDHQ9UI17 866 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 DMTF1Q9Y222 760 aa11.53□□□□□ -0.56
PDLIM5-210ENST00000508216 USP15Q9Y4E8 981 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms