RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 N4BP3O15049 544 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 KLRC4O43908 158 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 PRR29P0C7W0 189 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 CASP1P29466 404 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 MBTPS1Q14703 1052 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 CAMK4Q16566 473 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 TRIML1Q8N9V2 468 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 TMEM40Q8WWA1 233 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 C1orf112Q9NSG2 853 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 AGPAT5Q9NUQ2 364 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 TBC1D7Q9P0N9 293 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 KIAA1468Q9P260 1216 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 TBX20Q9UMR3 447 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 DNAH12Q6ZR08 3092 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 LETM1O95202 739 aaPredicted RBP22.05■■□□□ 1.12
USP53-203ENST00000507597 NMT1P30419 496 aaKnown RBP22.05■■□□□ 1.12
USP53-203ENST00000507597 STIM1Q13586 685 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 HSP90AA2PQ14568 343 aaPredicted RBP22.05■■□□□ 1.12
USP53-203ENST00000507597 KLHL40Q2TBA0 621 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 CCDC183Q5T5S1 534 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 NT5DC1Q5TFE4 455 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 ZPBP2Q6X784 338 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 HACE1Q8IYU2 909 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 SYCP3Q8IZU3 236 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 SPATA20Q8TB22 786 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 KIFC3Q9BVG8 833 aa22.05■■□□□ 1.12
USP53-203ENST00000507597 AGO3Q9H9G7 860 aaKnown RBP22.05■■□□□ 1.12
USP53-203ENST00000507597 PIN4Q9Y237 131 aaKnown RBP22.05■■□□□ 1.12
USP53-203ENST00000507597 KCNJ6P48051 423 aa22.04■■□□□ 1.12
USP53-203ENST00000507597 EHHADHQ08426 723 aa22.04■■□□□ 1.12
USP53-203ENST00000507597 L1TD1Q5T7N2 865 aaKnown RBP22.04■■□□□ 1.12
USP53-203ENST00000507597 TRIM6Q9C030 488 aaPredicted RBP22.04■■□□□ 1.12
USP53-203ENST00000507597 CCDC113Q9H0I3 377 aa22.04■■□□□ 1.12
USP53-203ENST00000507597 MINDY3Q9H8M7 445 aa22.04■■□□□ 1.12
USP53-203ENST00000507597 SLC39A2Q9NP94 309 aa22.04■■□□□ 1.12
USP53-203ENST00000507597 CNTNAP2Q9UHC6 1331 aa22.04■■□□□ 1.12
USP53-203ENST00000507597 H0YGN5 161 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 CSDE1O75534 798 aaKnown RBP22.03■■□□□ 1.12
USP53-203ENST00000507597 MAGEA10P43363 369 aaPredicted RBP22.03■■□□□ 1.12
USP53-203ENST00000507597 SARSP49591 514 aaKnown RBP22.03■■□□□ 1.12
USP53-203ENST00000507597 LIG4P49917 911 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 RAB27AP51159 221 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 SNRPFP62306 86 aaKnown RBP22.03■■□□□ 1.12
USP53-203ENST00000507597 ZNF658Q5TYW1 1059 aaPredicted RBP22.03■■□□□ 1.12
USP53-203ENST00000507597 TWF2Q6IBS0 349 aaKnown RBP22.03■■□□□ 1.12
USP53-203ENST00000507597 SLFN12LQ6IEE8 588 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 MAP4K3Q8IVH8 894 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 FIZ1Q96SL8 496 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 TCHPQ9BT92 498 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 CGNQ9P2M7 1197 aaKnown RBP22.03■■□□□ 1.12
USP53-203ENST00000507597 MYH11P35749 1972 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 ADGRA3Q8IWK6 1321 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 TANC1Q9C0D5 1861 aa22.03■■□□□ 1.12
USP53-203ENST00000507597 HNRNPDLO14979 420 aaKnown RBP22.02■■□□□ 1.12
USP53-203ENST00000507597 TSPAN1O60635 241 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 FGFR4P22455 802 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 GPNMBQ14956 572 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 NFKBIBQ15653 356 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 ATF7IP2Q5U623 682 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 SLC27A1Q6PCB7 646 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 SLC24A5Q71RS6 500 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 MYOCDQ8IZQ8 938 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 GOLGA5Q8TBA6 731 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 ZNF507Q8TCN5 953 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 UBE2OQ9C0C9 1292 aaKnown RBP22.02■■□□□ 1.12
USP53-203ENST00000507597 RGS18Q9NS28 235 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 TNFSF13BQ9Y275 285 aa22.02■■□□□ 1.12
USP53-203ENST00000507597 A0A1B0GUA9 196 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 TOM1L1O75674 476 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 PPP1R37O75864 691 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 AMHP03971 560 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 STAG3L1P0CL83 205 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 ACRP10323 421 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 ARF4P18085 180 aaPredicted RBP22.01■■□□□ 1.11
USP53-203ENST00000507597 MATR3P43243 847 aaKnown RBP eCLIP22.01■■□□□ 1.119e-7■■■■□ 20.5
USP53-203ENST00000507597 AMHR2Q16671 573 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 KYAT1Q16773 422 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 DCAF4L1Q3SXM0 396 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 ZNF365Q70YC5 407 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 HS2ST1Q7LGA3 356 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 PGBD4Q96DM1 585 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 ACO2Q99798 780 aaKnown RBP22.01■■□□□ 1.11
USP53-203ENST00000507597 ADAM2Q99965 735 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 TRAIPQ9BWF2 469 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 STRA6Q9BX79 667 aa22.01■■□□□ 1.11
USP53-203ENST00000507597 TSPYL2Q9H2G4 693 aaPredicted RBP22.01■■□□□ 1.11
USP53-203ENST00000507597 ZBBXA8MT70 800 aa22■■□□□ 1.11
USP53-203ENST00000507597 CLDN3O15551 220 aa22■■□□□ 1.11
USP53-203ENST00000507597 PIGRP01833 764 aa22■■□□□ 1.11
USP53-203ENST00000507597 MYBP10242 640 aa22■■□□□ 1.11
USP53-203ENST00000507597 BMP8BP34820 402 aa22■■□□□ 1.11
USP53-203ENST00000507597 STK4Q13043 487 aa22■■□□□ 1.11
USP53-203ENST00000507597 BMT2Q1RMZ1 405 aa22■■□□□ 1.11
USP53-203ENST00000507597 ZC2HC1CQ53FD0 456 aaPredicted RBP22■■□□□ 1.11
USP53-203ENST00000507597 COBLL1Q53SF7 1204 aa22■■□□□ 1.11
USP53-203ENST00000507597 TMEM240Q5SV17 173 aa22■■□□□ 1.11
USP53-203ENST00000507597 SASS6Q6UVJ0 657 aa22■■□□□ 1.11
USP53-203ENST00000507597 GUF1Q8N442 669 aaKnown RBP22■■□□□ 1.11
USP53-203ENST00000507597 RSPH1Q8WYR4 309 aa22■■□□□ 1.11
USP53-203ENST00000507597 HERVK_113Q902F9 699 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms