RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 GJA10Q969M2 543 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 RMDN1Q96DB5 314 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 IGSF21Q96ID5 467 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 FAM167AQ96KS9 214 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 NLRP4Q96MN2 994 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 FDXACB1Q9BRP7 624 aaPredicted RBP6.5□□□□□ -1.37
GYPB-208ENST00000507009 EMILIN2Q9BXX0 1053 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 GCOM2Q9BZD3 368 aaPredicted RBP6.5□□□□□ -1.37
GYPB-208ENST00000507009 PRKD2Q9BZL6 878 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 NRDE2Q9H7Z3 1164 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 SFXN1Q9H9B4 322 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 KCNK12Q9HB15 430 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 ANO2Q9NQ90 1003 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 NRBP2Q9NSY0 501 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 RBM28Q9NW13 759 aaKnown RBP6.5□□□□□ -1.37
GYPB-208ENST00000507009 BARHL2Q9NY43 387 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 DACT1Q9NYF0 836 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 CEP131Q9UPN4 1083 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 PIN4Q9Y237 131 aaKnown RBP6.5□□□□□ -1.37
GYPB-208ENST00000507009 PCDHA10Q9Y5I2 948 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 MAFBQ9Y5Q3 323 aaPredicted RBP6.5□□□□□ -1.37
GYPB-208ENST00000507009 WDR81Q562E7 1941 aa6.5□□□□□ -1.37
GYPB-208ENST00000507009 VPS13AQ96RL7 3174 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 IGLV3-22A0A075B6J6 115 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 A0A0U1RQF3 1178 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 KLF18A0A0U1RQI7 1052 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 CCDC195A0A1B0GUA6 201 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 WDR64B1ANS9 1081 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 ZNF862O60290 1169 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 LMNAP02545 664 aaKnown RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 GALTP07902 379 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 SPATA31D3P0C874 917 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 LIFRP42702 1097 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 PHKA2P46019 1235 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 CLK2P49760 499 aaKnown RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 IRX6P78412 446 aaPredicted RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 FGD1P98174 961 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 SETQ01105 290 aaPredicted RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 DRP2Q13474 957 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 AAMPQ13685 434 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 PTPN14Q15678 1187 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 SPATA31D4Q6ZUB0 917 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 NIPA1Q7RTP0 329 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 CATSPER4Q7RTX7 472 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 GPR149Q86SP6 731 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 DDX53Q86TM3 631 aaKnown RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 ZNF598Q86UK7 904 aaKnown RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 PPFIBP1Q86W92 1011 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 ZNF280BQ86YH2 543 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 RHPN2Q8IUC4 686 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 KSR1Q8IVT5 923 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 SMAP1Q8IYB5 467 aaPredicted RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 DCLK2Q8N568 766 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 URGCPQ8TCY9 931 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 KLHL5Q96PQ7 755 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 FAM193BQ96PV7 902 aaPredicted RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 RTP3Q9BQQ7 232 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 TBC1D17Q9HA65 648 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 PIDD1Q9HB75 910 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 MAN1C1Q9NR34 630 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 DISC1Q9NRI5 854 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 TBC1D22BQ9NU19 505 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 TBC1D13Q9NVG8 400 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 BRPF3Q9ULD4 1205 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 DUSP12Q9UNI6 340 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 USTQ9Y2C2 406 aa6.49□□□□□ -1.37
GYPB-208ENST00000507009 PRG3Q9Y2Y8 225 aaPredicted RBP6.49□□□□□ -1.37
GYPB-208ENST00000507009 WDR87Q6ZQQ6 2873 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 KRBA1A5PL33 1030 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 DDX11L8A8MPP1 907 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 B4GALT3O60512 393 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 GAS7O60861 476 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 POMCP01189 267 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 CNPP09543 421 aaKnown RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 SFPQP23246 707 aaKnown RBP eCLIP6.48□□□□□ -1.37
GYPB-208ENST00000507009 CDC27P30260 824 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 ADD1P35611 737 aaKnown RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 OR1G1P47890 313 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 DNM2P50570 870 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 CLCN4P51793 760 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 POLGP54098 1239 aaPredicted RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 PTGDRQ13258 359 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 GIT2Q14161 759 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 LAPTM4AQ15012 233 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 LETM2Q2VYF4 491 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 PLA2G4FQ68DD2 849 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 GET4Q7L5D6 327 aaPredicted RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 PALB2Q86YC2 1186 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 REXO1Q8N1G1 1221 aaKnown RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 GPR152Q8TDT2 470 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 SMG7Q92540 1137 aaKnown RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 CCDC136Q96JN2 1154 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 MTA3Q9BTC8 594 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 APOL6Q9BWW8 343 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 VN1R3Q9BXE9 311 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 TEKT3Q9BXF9 490 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 LSG1Q9H089 658 aaKnown RBP6.48□□□□□ -1.37
GYPB-208ENST00000507009 GLT8D2Q9H1C3 349 aa6.48□□□□□ -1.37
GYPB-208ENST00000507009 UNC45AQ9H3U1 944 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms