RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 IKBKEQ14164 716 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 MAPK6Q16659 721 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 RASIP1Q5U651 963 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 CATSPER4Q7RTX7 472 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 SPATA20Q8TB22 786 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 GPT2Q8TD30 523 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 HERVK_113Q902F9 699 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 CHST12Q9NRB3 414 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 AGPAT5Q9NUQ2 364 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 MICAL3Q7RTP6 2002 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-210ENST00000506767 DENND3A2RUS2 1198 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 ENPP3O14638 875 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 EFCAB14O75071 495 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 RPN1P04843 607 aaKnown RBP14.14□□□□□ -0.15
TCOF1-210ENST00000506767 PRKCBP05771 671 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 AXLP30530 894 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 ABCD1P33897 745 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 SARSP49591 514 aaKnown RBP14.14□□□□□ -0.15
TCOF1-210ENST00000506767 PNOCQ13519 176 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 KMT5BQ4FZB7 885 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 C9orf50Q5SZB4 431 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 OTOP2Q7RTS6 562 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 LINC01599Q8WXQ3 324 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 TRAIPQ9BWF2 469 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 FGFBP2Q9BYJ0 223 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 UBE2OQ9C0C9 1292 aaKnown RBP14.14□□□□□ -0.15
TCOF1-210ENST00000506767 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-210ENST00000506767 MRPL44Q9H9J2 332 aaKnown RBP14.14□□□□□ -0.15
TCOF1-210ENST00000506767 RGS18Q9NS28 235 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 CNTNAP2Q9UHC6 1331 aa14.14□□□□□ -0.15
TCOF1-210ENST00000506767 A0A1B0GUA9 196 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 TTLL13PA6NNM8 815 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 K7ENM7 598 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 B4GALT5O43286 388 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 ERLIN2O94905 339 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 RHOBTB3O94955 611 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 ARF4P18085 180 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-210ENST00000506767 CASP5P51878 434 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 PSMD2Q13200 908 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 KCNB1Q14721 858 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 SHHQ15465 462 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 ZC2HC1CQ53FD0 456 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-210ENST00000506767 FAM26FQ5R3K3 315 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 NT5DC1Q5TFE4 455 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 EPM2AIP1Q7L775 607 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-210ENST00000506767 HPS3Q969F9 1004 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 HVCN1Q96D96 273 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 ADAM2Q99965 735 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 TBC1D7Q9P0N9 293 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 HOOK1Q9UJC3 728 aaKnown RBP14.13□□□□□ -0.15
TCOF1-210ENST00000506767 TBX20Q9UMR3 447 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 PCDHA5Q9Y5H7 936 aa14.13□□□□□ -0.15
TCOF1-210ENST00000506767 PTPRSQ13332 1948 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 C9IYK1 514 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 MBD3O95983 291 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 PIGRP01833 764 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 MYBP10242 640 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 ZSCAN20P17040 1043 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-210ENST00000506767 WDR5P61964 334 aaKnown RBP14.12□□□□□ -0.15
TCOF1-210ENST00000506767 FAM189BP81408 668 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 PRPF4BQ13523 1007 aaKnown RBP14.12□□□□□ -0.15
TCOF1-210ENST00000506767 ALCAMQ13740 583 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 UBXN11Q5T124 520 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 NOTUMQ6P988 496 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.15
TCOF1-210ENST00000506767 MAP4K3Q8IVH8 894 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 CRIPAKQ8N1N5 446 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 GLIS3Q8NEA6 775 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 ERCC4Q92889 916 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-210ENST00000506767 CPB2Q96IY4 423 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 GSDMAQ96QA5 445 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 ACO2Q99798 780 aaKnown RBP14.12□□□□□ -0.15
TCOF1-210ENST00000506767 CLSTN2Q9H4D0 955 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 C1orf112Q9NSG2 853 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 CXXC1Q9P0U4 656 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-210ENST00000506767 PIN4Q9Y237 131 aaKnown RBP14.12□□□□□ -0.15
TCOF1-210ENST00000506767 USP20Q9Y2K6 914 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 PCDHB13Q9Y5F0 798 aa14.12□□□□□ -0.15
TCOF1-210ENST00000506767 EIF3DO15371 548 aaKnown RBP eCLIP14.11□□□□□ -0.15
TCOF1-210ENST00000506767 GCNT3O95395 438 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 PROZP22891 400 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 NCBP1Q09161 790 aaKnown RBP14.11□□□□□ -0.15
TCOF1-210ENST00000506767 STRN3Q13033 797 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 STK4Q13043 487 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 L1TD1Q5T7N2 865 aaKnown RBP14.11□□□□□ -0.15
TCOF1-210ENST00000506767 ZPBP2Q6X784 338 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 SLC24A5Q71RS6 500 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 ZNF507Q8TCN5 953 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 CCDC51Q96ER9 411 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 MRPL4Q9BYD3 311 aaKnown RBP14.11□□□□□ -0.15
TCOF1-210ENST00000506767 PDZD7Q9H5P4 517 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 PTPRHQ9HD43 1115 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 SLC39A2Q9NP94 309 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 EXOC1Q9NV70 894 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 TNFSF13BQ9Y275 285 aa14.11□□□□□ -0.15
TCOF1-210ENST00000506767 A0A0U1RQF3 1178 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 ABLIM1O14639 778 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 N4BP3O15049 544 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 ZNF623O75123 536 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms