RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ZBTB21Q9ULJ3 1066 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 ZNF536O15090 1300 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 LAMTOR5O43504 91 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 AKAP10O43572 662 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 AKR1B10O60218 316 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 PRAMEF4O60810 478 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 ALDH1A2O94788 518 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 TOX4O94842 621 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 INHBBP09529 407 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 CTSSP25774 331 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 EPHB1P54762 984 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 MALLQ13021 153 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 FZD5Q13467 585 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 SURF1Q15526 300 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 TBC1D10BQ4KMP7 808 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 ZFYVE27Q5T4F4 411 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 KRT40Q6A162 431 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 SNX33Q8WV41 574 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 SSH1Q8WYL5 1049 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 DPYSL5Q9BPU6 564 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 GREM2Q9H772 168 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 C14orf93Q9H972 538 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 DNM3Q9UQ16 869 aa5.38□□□□□ -1.55
TOPBP1-204ENST00000505804 KRTAP9-6A0A140TA67 174 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 SLC26A4O43511 780 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 VSIG10L2P0DP72 767 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 CR2P20023 1033 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 HOXA5P20719 270 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 ADSLP30566 484 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 MCAMP43121 646 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 EPHB4P54760 987 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 ADAM8P78325 824 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 PPP3CAQ08209 521 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 SAFB2Q14151 953 aaKnown RBP eCLIP5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 TAX1BP1Q86VP1 789 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 CPA6Q8N4T0 437 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 GPR156Q8NFN8 814 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 NRG4Q8WWG1 115 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 DPF2Q92785 391 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 GNRHR2Q96P88 292 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 GPHA2Q96T91 129 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 ADI1Q9BV57 179 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 AGO3Q9H9G7 860 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 SEC61A2Q9H9S3 476 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 TLR9Q9NR96 1032 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 PPP4R1LQ9P1A2 415 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 KLHL42Q9P2K6 505 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 NCDNQ9UBB6 729 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 EID1Q9Y6B2 187 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 RPTORQ8N122 1335 aa5.37□□□□□ -1.55
TOPBP1-204ENST00000505804 NPEPPSL1A6NEC2 478 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 CDC14BO60729 498 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 ZRANB2O95218 330 aaKnown RBP eCLIP5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 JUNP05412 331 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 ZSCAN20P17040 1043 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 MEF2AQ02078 507 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 KIF23Q02241 960 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 NOMO1Q15155 1222 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 C19orf54Q5BKX5 351 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 SLFN13Q68D06 897 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 LIMS2Q7Z4I7 341 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 ADGRE4PQ86SQ3 457 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 CMTR2Q8IYT2 770 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 GPR135Q8IZ08 494 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 SHCBP1Q8NEM2 672 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 RABGGTAQ92696 567 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 PAWRQ96IZ0 340 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 C20orf173Q96LM9 149 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 TEPSINQ96N21 525 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 MEGF9Q9H1U4 602 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 RBM12Q9NTZ6 932 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 ZIM2Q9NZV7 527 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 INTUQ9ULD6 942 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 OAZ3Q9UMX2 235 aa5.36□□□□□ -1.55
TOPBP1-204ENST00000505804 A0A0G2JLL6 359 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 ABLIM3O94929 683 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 PLATP00750 562 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 HSP90B1P14625 803 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 PIN1Q13526 163 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 RIN1Q13671 783 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 LRRC41Q15345 812 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 GAGE13Q4V321 117 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 FAM180AQ6UWF9 173 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 Q6ZVL8 140 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 TTLL10Q6ZVT0 673 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 CMTM4Q8IZR5 234 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 THEMISQ8N1K5 641 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 OR2I1PQ8NGU4 316 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 COA7Q96BR5 231 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 HSPBAP1Q96EW2 488 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 RTFDC1Q9BY42 306 aaPredicted RBP5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 METTL14Q9HCE5 456 aaKnown RBP5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 TCF7L1Q9HCS4 588 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 SERPINB13Q9UIV8 391 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 ZNF180Q9UJW8 692 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 RCAN3Q9UKA8 241 aa5.35□□□□□ -1.55
TOPBP1-204ENST00000505804 ANKRD6Q9Y2G4 727 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms