RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 RINT1Q6NUQ1 792 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 C1orf186Q6ZWK4 172 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 SYT2Q8N9I0 419 aaPredicted RBP18.67■□□□□ 0.58
SYNE4-207ENST00000505054 RNF149Q8NC42 400 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 BSNDQ8WZ55 320 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 RAD54LQ92698 747 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 GCOM2Q9BZD3 368 aaPredicted RBP18.67■□□□□ 0.58
SYNE4-207ENST00000505054 POLD4Q9HCU8 107 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 CIZ1Q9ULV3 898 aaPredicted RBP18.67■□□□□ 0.58
SYNE4-207ENST00000505054 ST3GAL5Q9UNP4 418 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 ZNF318Q5VUA4 2279 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 GRM6O15303 877 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 ASAP2O43150 1006 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 SSBP05455 408 aaKnown RBP eCLIP18.66■□□□□ 0.58
SYNE4-207ENST00000505054 SRGAP2CP0DJJ0 459 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 FGFR4P22455 802 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 LTBRP36941 435 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 TXLNAP40222 546 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 NFX1Q12986 1120 aaKnown RBP18.66■□□□□ 0.58
SYNE4-207ENST00000505054 MXD4Q14582 209 aaPredicted RBP18.66■□□□□ 0.58
SYNE4-207ENST00000505054 CTC1Q2NKJ3 1217 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 DAW1Q8N136 415 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 ZNF689Q96CS4 500 aaPredicted RBP18.66■□□□□ 0.58
SYNE4-207ENST00000505054 SPATA32Q96LK8 384 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 POP1Q99575 1024 aaKnown RBP18.66■□□□□ 0.58
SYNE4-207ENST00000505054 MINDY3Q9H8M7 445 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 C5orf42Q9H799 3197 aa18.66■□□□□ 0.58
SYNE4-207ENST00000505054 GPR182O15218 404 aa18.65■□□□□ 0.58
SYNE4-207ENST00000505054 MGEA5O60502 916 aa18.65■□□□□ 0.58
SYNE4-207ENST00000505054 HYAL1Q12794 435 aa18.65■□□□□ 0.58
SYNE4-207ENST00000505054 MAPK7Q13164 816 aa18.65■□□□□ 0.58
SYNE4-207ENST00000505054 BTG3Q14201 252 aaPredicted RBP18.65■□□□□ 0.58
SYNE4-207ENST00000505054 MCM6Q14566 821 aa18.65■□□□□ 0.58
SYNE4-207ENST00000505054 SMAD2Q15796 467 aaKnown RBP18.65■□□□□ 0.58
SYNE4-207ENST00000505054 RTN4RL1Q86UN2 441 aaPredicted RBP18.65■□□□□ 0.58
SYNE4-207ENST00000505054 LARP4BQ92615 738 aaKnown RBP18.65■□□□□ 0.58
SYNE4-207ENST00000505054 PLVAPQ9BX97 442 aa18.65■□□□□ 0.58
SYNE4-207ENST00000505054 KCNH6Q9H252 994 aa18.65■□□□□ 0.58
SYNE4-207ENST00000505054 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
SYNE4-207ENST00000505054 HIP1RO75146 1068 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 GUCY2CP25092 1073 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 PHKA2P46019 1235 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 PTENP60484 403 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 TFDP1Q14186 410 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 DSC3Q14574 896 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 ARSHQ5FYA8 562 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 RRAGBQ5VZM2 374 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 GPBP1Q86WP2 473 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 IFNLR1Q8IU57 520 aaPredicted RBP18.64■□□□□ 0.57
SYNE4-207ENST00000505054 KIFAP3Q92845 792 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 FTHL17Q9BXU8 183 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 PANK2Q9BZ23 570 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
SYNE4-207ENST00000505054 GDPD2Q9HCC8 539 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 STK17AQ9UEE5 414 aa18.64■□□□□ 0.57
SYNE4-207ENST00000505054 PLXNA4Q9HCM2 1894 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 NPHP3-ACAD11A0A0J9YXS1 232 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 ENPP3O14638 875 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 MBTPS2O43462 519 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 TBX10O75333 385 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 DGKIO75912 1065 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 SFPQP23246 707 aaKnown RBP eCLIP18.63■□□□□ 0.57
SYNE4-207ENST00000505054 IRS1P35568 1242 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 POU5F1BQ06416 359 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 RAD51AP2Q09MP3 1159 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 SMAD4Q13485 552 aaKnown RBP18.63■□□□□ 0.57
SYNE4-207ENST00000505054 DHX8Q14562 1220 aaKnown RBP18.63■□□□□ 0.57
SYNE4-207ENST00000505054 ODR4Q5SWX8 454 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 RESP18Q5W5W9 173 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 CCDC73Q6ZRK6 1079 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 SRGAP1Q7Z6B7 1085 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 ALYREFQ86V81 257 aaKnown RBP18.63■□□□□ 0.57
SYNE4-207ENST00000505054 PDILTQ8N807 584 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 P2RX5Q93086 422 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 NFKBIZQ9BYH8 718 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 INO80BQ9C086 356 aaPredicted RBP18.63■□□□□ 0.57
SYNE4-207ENST00000505054 KCND2Q9NZV8 630 aa18.63■□□□□ 0.57
SYNE4-207ENST00000505054 LRRIQ4A6NIV6 560 aa18.62■□□□□ 0.57
SYNE4-207ENST00000505054 MBTD1Q05BQ5 628 aa18.62■□□□□ 0.57
SYNE4-207ENST00000505054 DLX2Q07687 328 aaPredicted RBP18.62■□□□□ 0.57
SYNE4-207ENST00000505054 CLUL1Q15846 466 aa18.62■□□□□ 0.57
SYNE4-207ENST00000505054 E2F4Q16254 413 aa18.62■□□□□ 0.57
SYNE4-207ENST00000505054 CDCA2Q69YH5 1023 aaPredicted RBP18.62■□□□□ 0.57
SYNE4-207ENST00000505054 CATSPER4Q7RTX7 472 aa18.62■□□□□ 0.57
SYNE4-207ENST00000505054 CMTR2Q8IYT2 770 aaKnown RBP18.62■□□□□ 0.57
SYNE4-207ENST00000505054 TIPINQ9BVW5 301 aa18.62■□□□□ 0.57
SYNE4-207ENST00000505054 STAT6P42226 847 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 NAMPTP43490 491 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 CACNB1Q02641 598 aaPredicted RBP18.61■□□□□ 0.57
SYNE4-207ENST00000505054 AMHR2Q16671 573 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 NPAS4Q8IUM7 802 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 PPP2R3CQ969Q6 453 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 DRC1Q96MC2 740 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 ADAM2Q99965 735 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 REEP2Q9BRK0 252 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 KIFC3Q9BVG8 833 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 CD207Q9UJ71 328 aa18.61■□□□□ 0.57
SYNE4-207ENST00000505054 MRPL42Q9Y6G3 142 aaKnown RBP18.61■□□□□ 0.57
SYNE4-207ENST00000505054 FNDC1Q4ZHG4 1894 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms