RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-208ENST00000504813 UHRF1Q96T88 793 aaPredicted RBP16.34■□□□□ 0.21
CNBP-208ENST00000504813 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.34■□□□□ 0.21
CNBP-208ENST00000504813 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
CNBP-208ENST00000504813 MEIS3P2A8K0S8 358 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 LAD1O00515 517 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 GADD45BO75293 160 aaPredicted RBP16.33■□□□□ 0.2
CNBP-208ENST00000504813 CSPG5O95196 566 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 RAB27AP51159 221 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 TFDP1Q14186 410 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 PCBP1Q15365 356 aaKnown RBP eCLIP16.33■□□□□ 0.2
CNBP-208ENST00000504813 IL17AQ16552 155 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 CTC1Q2NKJ3 1217 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 RILPL1Q5EBL4 403 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 UBXN11Q5T124 520 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 HAUS3Q68CZ6 603 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.33■□□□□ 0.2
CNBP-208ENST00000504813 NFKBIZQ9BYH8 718 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.2
CNBP-208ENST00000504813 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
CNBP-208ENST00000504813 TDRD15B5MCY1 1934 aaKnown RBP16.32■□□□□ 0.2
CNBP-208ENST00000504813 YEATS4O95619 227 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 GTF2F1P35269 517 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■■■□□ 14.6
CNBP-208ENST00000504813 LTBRP36941 435 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 PRPHP41219 470 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 LONRF3Q496Y0 759 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 TPRNQ4KMQ1 711 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 KCNT2Q6UVM3 1135 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 MRPL10Q7Z7H8 261 aaKnown RBP16.32■□□□□ 0.2
CNBP-208ENST00000504813 ADGRD2Q7Z7M1 963 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 THNSL1Q8IYQ7 743 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 GPT2Q8TD30 523 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 KCNG4Q8TDN1 519 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 RSPH1Q8WYR4 309 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 NECAB3Q96P71 396 aaPredicted RBP16.32■□□□□ 0.2
CNBP-208ENST00000504813 POLR3FQ9H1D9 316 aaPredicted RBP16.32■□□□□ 0.2
CNBP-208ENST00000504813 GPRC5CQ9NQ84 441 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 PCDHB2Q9Y5E7 798 aa16.32■□□□□ 0.2
CNBP-208ENST00000504813 TCHHQ07283 1943 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 TNFRSF10AO00220 468 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 NCK2O43639 380 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 TSPAN1O60635 241 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 ERLIN2O94905 339 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
CNBP-208ENST00000504813 PBX3P40426 434 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 ERVFC1P60507 584 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 PLCB3Q01970 1234 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 MBTD1Q05BQ5 628 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 AMHR2Q16671 573 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 MAEAQ7L5Y9 396 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 MCPH1Q8NEM0 835 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 ZNF558Q96NG5 402 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 MRPL9Q9BYD2 267 aaKnown RBP16.31■□□□□ 0.2
CNBP-208ENST00000504813 TLR9Q9NR96 1032 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 CLDND1Q9NY35 253 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 PCDHGC5Q9Y5F6 944 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 TTC28Q96AY4 2481 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 MYH15Q9Y2K3 1946 aa16.31■□□□□ 0.2
CNBP-208ENST00000504813 INO80B-WBP1J3KQ70 363 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 OFD1O75665 1012 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 AXLP30530 894 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 ME1P48163 572 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
CNBP-208ENST00000504813 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
CNBP-208ENST00000504813 PADI6Q6TGC4 694 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 AGMOQ6ZNB7 445 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 MRPS27Q92552 414 aaKnown RBP16.3■□□□□ 0.2
CNBP-208ENST00000504813 PGBD4Q96DM1 585 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 RAB34Q9BZG1 259 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 CLIC4Q9Y696 253 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 STK24Q9Y6E0 443 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 C5orf42Q9H799 3197 aa16.3■□□□□ 0.2
CNBP-208ENST00000504813 ARHGEF35A5YM69 484 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 H3BQ06 376 aaPredicted RBP16.29■□□□□ 0.2
CNBP-208ENST00000504813 FSCN2O14926 492 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 SPTLC2O15270 562 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 LINC01565O15544 149 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 CYP11B2P19099 503 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 PPM1AP35813 382 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 ATP2C1P98194 919 aaPredicted RBP16.29■□□□□ 0.2
CNBP-208ENST00000504813 DLX2Q07687 328 aaPredicted RBP16.29■□□□□ 0.2
CNBP-208ENST00000504813 ADAM15Q13444 863 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 NOMO2Q5JPE7 1267 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 GLB1LQ6UWU2 654 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
CNBP-208ENST00000504813 SNX29Q8TEQ0 813 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 CPB2Q96IY4 423 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 IGFLR1Q9H665 355 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 TBC1D13Q9NVG8 400 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 KIAA1024Q9UPX6 916 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 MYH11P35749 1972 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 PP2D1A8MPX8 630 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 ARF4P18085 180 aaPredicted RBP16.29■□□□□ 0.2
CNBP-208ENST00000504813 CDC25AP30304 524 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 BCAR1P56945 870 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 GSE1Q14687 1217 aa16.29■□□□□ 0.2
CNBP-208ENST00000504813 CDCA2Q69YH5 1023 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms